RNA id: TU84336


Basic Information

Item Value
RNA id TU84336
length 209
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G67536
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 42585827 ~ 42586035 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GACAACATAGTGTGGTGTTACTCTTGCTGGCAACCTCTCTACGATGATTtggctttgaaaaaaaataatctgaaatttGTGCAAGGTCTCCCCGCCTCGTTGTGTGACGATGACTTGTTCCCGCCCGGTCAAACTAATCTAGTGATCCTTGATGACCTGATGGAGCAGGCCGGTGACAACAGTGAAGTGGAAAAAGCCTTCACAAAGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84333 lncRNA upstream 101900 42483528 ~ 42483927 (+) True G67533
TU84328 lncRNA upstream 111942 42473658 ~ 42473885 (+) True G67528
TU84321 lncRNA upstream 181561 42403821 ~ 42404266 (+) True G67521
TU84316 lncRNA upstream 189831 42395725 ~ 42395996 (+) True G67519
TU84275 lncRNA upstream 435860 42149559 ~ 42149967 (+) True G67479
TU84366 lncRNA downstream 305993 42892028 ~ 42892439 (+) True G67564
AMCG00021029 mRNA upstream 121644 42423343 ~ 42464183 (+) False AMCG00021029
AMCG00021024 mRNA upstream 460826 42122817 ~ 42125001 (+) True AMCG00021024
AMCG00021025 mRNA upstream 494171 42062717 ~ 42091656 (+) True AMCG00021025
AMCG00021023 mRNA upstream 570673 41983383 ~ 42015154 (+) True AMCG00021023
AMCG00021019 mRNA upstream 651082 41894833 ~ 41934745 (+) True AMCG00021019
AMCG00021034 mRNA downstream 39349 42625384 ~ 42919615 (+) True AMCG00021034
TU84320 other upstream 119941 42426111 ~ 42465886 (+) True AMCG00021029
TU84255 other upstream 532152 42052930 ~ 42053675 (+) True G67459
TU84094 other upstream 983714 41598223 ~ 41602113 (+) True G67323
TU84041 other upstream 1533269 41051472 ~ 41052558 (+) True AMCG00021005
TU83857 other upstream 2264006 40321113 ~ 40321821 (+) True G67108

Expression Profile