RNA id: TU84366


Basic Information

Item Value
RNA id TU84366
length 412
lncRNA type intronic
GC content 0.39
exon number 1
gene id G67564
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 42892028 ~ 42892439 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ttcaggtgatgcaggtgagactgattggtctgtaatttcctggctcagttttgtcccctttcttgtggattggtatgacatttgctgtcttccaagtcagttggcacatcccctgttctaagtgtcatttggaataatcgagttagcggcctataaataatttccctaatttctttaagtactgttggaaatatcccatctggcccaggtgatttgtttgtttttaattctgctagtccctttagtacctcctcctcatttatcctgatctctcttagggtttgactggactgattgtcaacctgtggcatgtcatctgttttttcttttgtaaaaacctctgtgaaatactcatttagaatatttgccacatcttgttcgttttccaagatacctaaatttttgcccttta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84336 lncRNA upstream 305993 42585827 ~ 42586035 (+) True G67536
TU84333 lncRNA upstream 408101 42483528 ~ 42483927 (+) True G67533
TU84328 lncRNA upstream 418143 42473658 ~ 42473885 (+) True G67528
TU84321 lncRNA upstream 487762 42403821 ~ 42404266 (+) True G67521
TU84316 lncRNA upstream 496032 42395725 ~ 42395996 (+) True G67519
AMCG00021029 mRNA upstream 427845 42423343 ~ 42464183 (+) False AMCG00021029
AMCG00021024 mRNA upstream 767027 42122817 ~ 42125001 (+) True AMCG00021024
AMCG00021025 mRNA upstream 800372 42062717 ~ 42091656 (+) True AMCG00021025
AMCG00021023 mRNA upstream 876874 41983383 ~ 42015154 (+) True AMCG00021023
AMCG00021019 mRNA upstream 957283 41894833 ~ 41934745 (+) True AMCG00021019
TU84320 other upstream 426142 42426111 ~ 42465886 (+) True AMCG00021029
TU84255 other upstream 838353 42052930 ~ 42053675 (+) True G67459
TU84094 other upstream 1289915 41598223 ~ 41602113 (+) True G67323
TU84041 other upstream 1839470 41051472 ~ 41052558 (+) True AMCG00021005
TU83857 other upstream 2570207 40321113 ~ 40321821 (+) True G67108

Expression Profile