RNA id: AMCG00021055


Basic Information

Item Value
RNA id AMCG00021055
length 429
RNA type mRNA
GC content 0.55
exon number 3
gene id AMCG00021055
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 1131494 ~ 1132630 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCGCAAGTGGTCGGGCGGCGAGGTGTCTGAATCGGCCGCTGTAATTGGCTGGAAGCACTCCAGctacattgtttatttctcaGAGACGGCACTGGGAGTCATGGAGCAGATGGACTGTAAACCCTACCAGCCGCTGTCGAAGGTCAGACACGAGATGGAGCTGGCCTACACGAGCTCTTCCGACGAGAGCGAGGACGGGCGCAACATGCGCAAGTCCTACACGTCCCGAGAAACCCTGCCCGACTACAGCCAGGAGCTGAGACTGAACTACAACAGCCACAGCAGGAAGCGCAAAGCAGTACCTGAACCCACCCAagGCAGCCTAAAATTTCTCTCAGGGAAGTCTAAATGGGTCATCCACAGACCCTGTGAATTCACACCCAATGACAAGACATTGCTCATGTCTCCTGGCAGAGGGAGCTTATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103832 lncRNA downstream 204930 922859 ~ 926564 (-) True G83205
TU103692 lncRNA downstream 1046367 84874 ~ 85127 (-) True G83091
TU103682 lncRNA downstream 1094603 36247 ~ 36891 (-) True G83081
TU103930 lncRNA upstream 722252 1854882 ~ 1865227 (-) True G83294
TU103932 lncRNA upstream 722252 1854882 ~ 1865227 (-) False G83294
TU103996 lncRNA upstream 947039 2079669 ~ 2080014 (-) True G83342
TU103997 lncRNA upstream 950547 2083177 ~ 2086079 (-) True G83343
TU104000 lncRNA upstream 972434 2105064 ~ 2106398 (-) True G83346
AMCG00021054 mRNA downstream 16966 1112388 ~ 1114528 (-) True AMCG00021054
AMCG00021056 mRNA downstream 89671 1029421 ~ 1041823 (-) True AMCG00021056
AMCG00021057 mRNA downstream 106129 1012539 ~ 1025365 (-) True AMCG00021057
AMCG00021053 mRNA downstream 120029 981937 ~ 1011465 (-) True AMCG00021053
AMCG00021051 mRNA downstream 173573 928292 ~ 957921 (-) True AMCG00021051
AMCG00021059 mRNA upstream 541255 1673885 ~ 1692615 (-) True AMCG00021059
AMCG00021060 mRNA upstream 622886 1755516 ~ 1790537 (-) True AMCG00021060
AMCG00021061 mRNA upstream 709991 1842621 ~ 1852544 (-) True AMCG00021061
AMCG00021064 mRNA upstream 772438 1905068 ~ 1917824 (-) True AMCG00021064
AMCG00021066 mRNA upstream 786753 1919383 ~ 1924543 (-) True AMCG00021066
TU103965 other upstream 840530 1973160 ~ 1977968 (-) True G83313
TU104110 other upstream 1324371 2457001 ~ 2459379 (-) True G83428
TU104173 other upstream 1548930 2681560 ~ 2681762 (-) False AMCG00021090
TU104502 other upstream 3616151 4748781 ~ 4751235 (-) False G83761
TU104623 other upstream 5411862 6544492 ~ 6546577 (-) True G83864

Expression Profile