Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021083 |
| length | 864 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 5 |
| gene id | AMCG00021083 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 2506216 ~ 2512207 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
| GO:0043401 | steroid hormone mediated signaling pathway | biological_process |
| GO:0030521 | androgen receptor signaling pathway | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0005497 | androgen binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K08557 | AR, NR3C4; androgen receptor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104074 | lncRNA | upstream | 213175 | 2278796 ~ 2293041 (+) | True | G83397 |
| TU104040 | lncRNA | upstream | 284493 | 2219093 ~ 2221723 (+) | True | AMCG00021076 |
| TU104037 | lncRNA | upstream | 304657 | 2201294 ~ 2201559 (+) | True | G83374 |
| TU103991 | lncRNA | upstream | 399310 | 2105182 ~ 2106906 (+) | True | G83338 |
| TU103978 | lncRNA | upstream | 422765 | 2083114 ~ 2083451 (+) | True | G83325 |
| TU104109 | lncRNA | downstream | 4052 | 2516259 ~ 2516915 (+) | True | G83427 |
| TU104126 | lncRNA | downstream | 10656 | 2522863 ~ 2525979 (+) | True | G83443 |
| TU104145 | lncRNA | downstream | 95062 | 2607269 ~ 2607670 (+) | True | G83459 |
| TU104186 | lncRNA | downstream | 252586 | 2764793 ~ 2765004 (+) | True | G83493 |
| TU104190 | lncRNA | downstream | 425278 | 2937485 ~ 2937685 (+) | True | G83497 |
| AMCG00021084 | mRNA | upstream | 26184 | 2457929 ~ 2480032 (+) | True | AMCG00021084 |
| AMCG00021079 | mRNA | upstream | 129322 | 2370079 ~ 2376894 (+) | True | AMCG00021079 |
| AMCG00021080 | mRNA | upstream | 153146 | 2349679 ~ 2353070 (+) | True | AMCG00021080 |
| AMCG00021081 | mRNA | upstream | 228788 | 2248989 ~ 2277428 (+) | True | AMCG00021081 |
| AMCG00021076 | mRNA | upstream | 276069 | 2209482 ~ 2230147 (+) | False | AMCG00021076 |
| AMCG00021087 | mRNA | downstream | 75961 | 2588168 ~ 2597708 (+) | True | AMCG00021087 |
| AMCG00021088 | mRNA | downstream | 140506 | 2652713 ~ 2670775 (+) | True | AMCG00021088 |
| AMCG00021089 | mRNA | downstream | 207249 | 2719456 ~ 2746353 (+) | True | AMCG00021089 |
| AMCG00021093 | mRNA | downstream | 953553 | 3465760 ~ 3471536 (+) | True | AMCG00021093 |
| AMCG00021095 | mRNA | downstream | 1071697 | 3583904 ~ 3587462 (+) | True | AMCG00021095 |
| TU103781 | other | upstream | 1579741 | 918006 ~ 926475 (+) | True | AMCG00021049 |
| TU104336 | other | downstream | 1285634 | 3797841 ~ 3798783 (+) | True | G83624 |
| TU104390 | other | downstream | 1615064 | 4127271 ~ 4129216 (+) | False | AMCG00021113 |
| TU104395 | other | downstream | 1718765 | 4230972 ~ 4233756 (+) | False | AMCG00021114 |
| TU104813 | other | downstream | 4603174 | 7115381 ~ 7121237 (+) | False | AMCG00021150 |
| TU104814 | other | downstream | 4603174 | 7115381 ~ 7121237 (+) | False | AMCG00021150 |
