RNA id: AMCG00021086



Basic Information


Item Value
RNA id AMCG00021086
length 288
RNA type mRNA
GC content 0.53
exon number 1
gene id AMCG00021086
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 2583330 ~ 2583617 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGGCACCCTCCCTTGGAGTTCAGTGACTGCTATTATGACAGTCCGGATTTTAGGGAGAGACTCAAGTGCTATGAAGCGGAACTGGACCGAACCAGCCGATTCCTGAAGGAGGTGATCAAAGACGGCAACAGCGTCATCGGCACCATCAAGAGTGAGTATGACATTGTTACTCTGATTGGCCAGTCCCGCACCGTGGCGCACACGCACAAAGACGGATCCATGCCATTGTGTTTGGACACACAGTCTCCGACTGGGAAAGTGCTCTGTCAGCTGTCGCTGGGATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104124 lncRNA downstream 66204 2515490 ~ 2517126 (-) True G83442
TU104123 lncRNA downstream 71781 2511324 ~ 2511549 (-) True G83441
TU104102 lncRNA downstream 228636 2353987 ~ 2354694 (-) True G83422
TU104034 lncRNA downstream 392421 2190626 ~ 2190909 (-) True G83371
TU104012 lncRNA downstream 436213 2144404 ~ 2147117 (-) True G83355
TU104158 lncRNA upstream 16892 2600509 ~ 2602840 (-) True G83465
TU104174 lncRNA upstream 106353 2689970 ~ 2690210 (-) True G83481
TU104192 lncRNA upstream 357966 2941583 ~ 2954613 (-) True G83499
TU104207 lncRNA upstream 452680 3036297 ~ 3056152 (-) True G83512
TU104212 lncRNA upstream 504077 3087694 ~ 3087955 (-) True G83517
AMCG00021085 mRNA downstream 6376 2522860 ~ 2576954 (-) True AMCG00021085
AMCG00021082 mRNA downstream 170996 2402174 ~ 2412334 (-) True AMCG00021082
AMCG00021077 mRNA downstream 337639 2230508 ~ 2245691 (-) True AMCG00021077
AMCG00021078 mRNA downstream 406796 2157649 ~ 2176534 (-) True AMCG00021078
AMCG00021075 mRNA downstream 476444 2086626 ~ 2106886 (-) True AMCG00021075
AMCG00021090 mRNA upstream 93968 2677585 ~ 2718919 (-) True AMCG00021090
AMCG00021091 mRNA upstream 671762 3255379 ~ 3265211 (-) True AMCG00021091
AMCG00021092 mRNA upstream 704377 3287994 ~ 3288740 (-) True AMCG00021092
AMCG00021105 mRNA upstream 1150139 3733756 ~ 3736353 (-) True AMCG00021105
AMCG00021110 mRNA upstream 1196204 3779821 ~ 3801007 (-) True AMCG00021110
TU104110 other downstream 123951 2457001 ~ 2459379 (-) True G83428
TU103965 other downstream 605362 1973160 ~ 1977968 (-) True G83313
TU104173 other upstream 97943 2681560 ~ 2681762 (-) False AMCG00021090
TU104502 other upstream 2165164 4748781 ~ 4751235 (-) False G83761
TU104623 other upstream 3960875 6544492 ~ 6546577 (-) True G83864
TU105805 other upstream 9943476 12527093 ~ 12527694 (-) True G84814
TU105842 other upstream 10136247 12719864 ~ 12801586 (-) True AMCG00021259

Expression Profile