RNA id: AMCG00021097



Basic Information


Item Value
RNA id AMCG00021097
length 663
RNA type mRNA
GC content 0.61
exon number 5
gene id AMCG00021097
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 3669058 ~ 3672076 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCAAAAAAGGACCTCCTGGAGCCCCTGGCCCCCCAggcccccccggccccccaggACCACAGGGCCCTCCTGGAATTCCTGGCATTCCAGGCATCCCGGGAAGCAATGCCAACGTGCCTGCTGGGCCTACTGGGCCACCCGGTCCCCCTGGACCCGCTGGGCCTCCGGGGCCACAAGGTCCTCCGGGCCCACAAGGACCTGCAGAGCCGtgaaatgctgctgctgctgcttctcttGACTGGTCGGTCGGGAAGCAACGCTCGCTCTTCCAGCGGAGCCCCTGGAGGAATGGACAAGGCCAGGGGCAGGGAATCCCAGCCTGCTGTGGTCCACTTGCAAGGCCAGGAAACAACAATACAAGTCAAGGAAGAAGGGGTACtcaaaaactggaaaatgatATCCATACACCCCAAGGTGTTCAAGATGCACTCGCGCTCGGGGGAGCTGGAGGTGCTTGTTGATGGCATGTACTTCATCTATAGTCAGGTAGAAGTGAGTACGGTCTTGGGCCTAACTCTTCCTTTCAACTGCATGCAGCTCGACCCCTTCTCCCTGCAGCCGTCCGAGACCTCCTCAGAGCAGACGCAGCACTCAGCAGAGGTCCTGAGTTGGCCATCGGGGCCTCCTGGCTTGGTCCTCTTCTTACCCGTAGCCTGGGAATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104226 lncRNA upstream 314772 3353985 ~ 3354286 (+) True G83528
TU104211 lncRNA upstream 581149 3087694 ~ 3087909 (+) True G83516
TU104190 lncRNA upstream 731373 2937485 ~ 2937685 (+) True G83497
TU104186 lncRNA upstream 904054 2764793 ~ 2765004 (+) True G83493
TU104145 lncRNA upstream 1061388 2607269 ~ 2607670 (+) True G83459
TU104333 lncRNA downstream 116951 3789027 ~ 3789246 (+) True G83621
TU104334 lncRNA downstream 122913 3794989 ~ 3795242 (+) True G83622
TU104335 lncRNA downstream 123268 3795344 ~ 3795611 (+) True G83623
TU104360 lncRNA downstream 263620 3935696 ~ 3935955 (+) True G83645
TU104422 lncRNA downstream 589925 4262001 ~ 4265982 (+) True G83704
AMCG00021095 mRNA upstream 81596 3583904 ~ 3587462 (+) True AMCG00021095
AMCG00021093 mRNA upstream 197522 3465760 ~ 3471536 (+) True AMCG00021093
AMCG00021089 mRNA upstream 922705 2719456 ~ 2746353 (+) True AMCG00021089
AMCG00021088 mRNA upstream 998283 2652713 ~ 2670775 (+) True AMCG00021088
AMCG00021087 mRNA upstream 1071350 2588168 ~ 2597708 (+) True AMCG00021087
AMCG00021096 mRNA downstream 1740 3673816 ~ 3674034 (+) True AMCG00021096
AMCG00021098 mRNA downstream 3003 3675079 ~ 3676379 (+) True AMCG00021098
AMCG00021094 mRNA downstream 7137 3679213 ~ 3682876 (+) True AMCG00021094
AMCG00021099 mRNA downstream 14064 3686140 ~ 3689745 (+) True AMCG00021099
AMCG00021100 mRNA downstream 32093 3704169 ~ 3708296 (+) True AMCG00021100
TU103781 other upstream 2742583 918006 ~ 926475 (+) True AMCG00021049
TU104336 other downstream 125765 3797841 ~ 3798783 (+) True G83624
TU104390 other downstream 455195 4127271 ~ 4129216 (+) False AMCG00021113
TU104395 other downstream 558896 4230972 ~ 4233756 (+) False AMCG00021114
TU104813 other downstream 3443305 7115381 ~ 7121237 (+) False AMCG00021150
TU104814 other downstream 3443305 7115381 ~ 7121237 (+) False AMCG00021150

Expression Profile