RNA id: AMCG00021106


Basic Information

Item Value
RNA id AMCG00021106
length 210
RNA type mRNA
GC content 0.51
exon number 2
gene id AMCG00021106
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 3758599 ~ 3760890 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAATGCCGTGGAACGCACTGTCTCTGGGCTGTCTTCTGCATTCGCTCTATTGATAGAGCAGAGGCCTGGTCAACACATCTCACCCctgcaccgcaccgcaccgcaccgctcTTCACAGTGGATGGTGGACATCCTGAACGGGTTTGGGCCGAGATCACGAGTTCACAAGGATGATGTAAAAGCATATATAATCATACTTGCGTACTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104226 lncRNA upstream 404313 3353985 ~ 3354286 (+) True G83528
TU104211 lncRNA upstream 670690 3087694 ~ 3087909 (+) True G83516
TU104190 lncRNA upstream 820914 2937485 ~ 2937685 (+) True G83497
TU104186 lncRNA upstream 993595 2764793 ~ 2765004 (+) True G83493
TU104145 lncRNA upstream 1150929 2607269 ~ 2607670 (+) True G83459
TU104333 lncRNA downstream 28137 3789027 ~ 3789246 (+) True G83621
TU104334 lncRNA downstream 34099 3794989 ~ 3795242 (+) True G83622
TU104335 lncRNA downstream 34454 3795344 ~ 3795611 (+) True G83623
TU104360 lncRNA downstream 174806 3935696 ~ 3935955 (+) True G83645
TU104422 lncRNA downstream 501111 4262001 ~ 4265982 (+) True G83704
AMCG00021104 mRNA upstream 907 3757144 ~ 3757692 (+) True AMCG00021104
AMCG00021103 mRNA upstream 9503 3741481 ~ 3749096 (+) True AMCG00021103
AMCG00021102 mRNA upstream 26881 3725004 ~ 3731718 (+) True AMCG00021102
AMCG00021100 mRNA upstream 50303 3704169 ~ 3708296 (+) True AMCG00021100
AMCG00021099 mRNA upstream 68854 3686140 ~ 3689745 (+) True AMCG00021099
AMCG00021101 mRNA downstream 1191 3762081 ~ 3773308 (+) True AMCG00021101
AMCG00021108 mRNA downstream 43321 3804211 ~ 3809015 (+) True AMCG00021108
AMCG00021107 mRNA downstream 80710 3841600 ~ 3844289 (+) True AMCG00021107
AMCG00021112 mRNA downstream 145263 3906153 ~ 3915644 (+) True AMCG00021112
AMCG00021113 mRNA downstream 366180 4127070 ~ 4129373 (+) True AMCG00021113
TU103781 other upstream 2832124 918006 ~ 926475 (+) True AMCG00021049
TU104336 other downstream 36951 3797841 ~ 3798783 (+) True G83624
TU104390 other downstream 366381 4127271 ~ 4129216 (+) False AMCG00021113
TU104395 other downstream 470082 4230972 ~ 4233756 (+) False AMCG00021114
TU104813 other downstream 3354491 7115381 ~ 7121237 (+) False AMCG00021150
TU104814 other downstream 3354491 7115381 ~ 7121237 (+) False AMCG00021150

Expression Profile