RNA id: AMCG00021157


Basic Information

Item Value
RNA id AMCG00021157
length 747
RNA type mRNA
GC content 0.49
exon number 11
gene id AMCG00021157
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 7223466 ~ 7325452 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTATGTGCTGCTTAGTTGCTTAGCAACAGCCGGGAGCAGTGATGCACAGTTGCAGGACCAGAGTTTCCCAGGCGAATACCATAATGGCCAGCAGGTGGTCCAGATGGCAGATTATGTGTTTTGGATATTCACTATGGGATGGCCAGGCCTTCAAGATGGGAAATTGGATGCTGTCAACCTTAACTGGGAGAACTTTCAAGGGGAAAGAGTTCAGTGCAGCCATACTAATCTGAAGAGCAGCTCTGATGGGATGGAAGCCAAGAGCTTCACTACCACTGGCTACACCAACTCAATAGCTTTGCATGAAACCGGTGGAGCCACAGACTATGTGACCTTCTCCATCTGTATGAATTGCGACTATATTGGCCTGGGTGTTGCCGGTACCACCTTGCTACCCGGTGCATTGCGGTTACTGAGACATGACGATTTGCTTCCGGACGACAGTAAAGATAACATCACAATTTTTACAAGGATTCTCGACAGGCTGCTTGATGGGTATGACAACCGTCTGAGACCTGGCCTGGGAGAAAGTATAACCGAAGTGAAAACTAATATCTATGTGACCAGCTTTGGACCAGTTTCAGACACAGATATGGCTAGAGCGAGGGAGTTGGAGGAGGTCAATGAAAAAGTCGCTCTTTCTAAGCGAGGGAACTGTGCTAGTAAATACAACGGGGAAGTGCAGGGAAGGAACAACCCGAGAGAAGAGAAGCTGGGCTCGCACCACACGTTTCAACAGGAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104820 lncRNA downstream 101017 7118073 ~ 7122449 (-) False AMCG00021153
TU104859 lncRNA upstream 65170 7390622 ~ 7390915 (-) True G84052
TU104860 lncRNA upstream 65612 7391064 ~ 7392433 (-) True G84053
TU104891 lncRNA upstream 137276 7462728 ~ 7469428 (-) True G84081
TU104901 lncRNA upstream 186109 7511561 ~ 7511989 (-) True G84089
TU104906 lncRNA upstream 228168 7553620 ~ 7560120 (-) False G84093
AMCG00021156 mRNA downstream 617 7205421 ~ 7222849 (-) True AMCG00021156
AMCG00021153 mRNA downstream 100975 7115420 ~ 7122491 (-) True AMCG00021153
AMCG00021155 mRNA downstream 121762 7088001 ~ 7101704 (-) True AMCG00021155
AMCG00021152 mRNA downstream 143827 7079178 ~ 7079639 (-) True AMCG00021152
AMCG00021154 mRNA downstream 160210 7052536 ~ 7063256 (-) True AMCG00021154
AMCG00021161 mRNA upstream 114580 7440032 ~ 7441027 (-) True AMCG00021161
AMCG00021162 mRNA upstream 144305 7469757 ~ 7479786 (-) True AMCG00021162
AMCG00021166 mRNA upstream 157121 7482573 ~ 7491914 (-) True AMCG00021166
AMCG00021169 mRNA upstream 489676 7815128 ~ 7816111 (-) True AMCG00021169
AMCG00021173 mRNA upstream 580706 7906158 ~ 7914299 (-) True AMCG00021173
TU104623 other downstream 676889 6544492 ~ 6546577 (-) True G83864
TU104502 other downstream 2472231 4748781 ~ 4751235 (-) False G83761
TU104173 other downstream 4541704 2681560 ~ 2681762 (-) False AMCG00021090
TU104110 other downstream 4764087 2457001 ~ 2459379 (-) True G83428
TU103965 other downstream 5245498 1973160 ~ 1977968 (-) True G83313
TU105805 other upstream 5201641 12527093 ~ 12527694 (-) True G84814
TU105842 other upstream 5394412 12719864 ~ 12801586 (-) True AMCG00021259
TU105989 other upstream 6301883 13627335 ~ 13627747 (-) True G84952
TU106093 other upstream 6544487 13869939 ~ 13917868 (-) True G85037
TU106219 other upstream 6724522 14049974 ~ 14051897 (-) True G85115

Expression Profile