RNA id: AMCG00021381



Basic Information


Item Value
RNA id AMCG00021381
length 444
RNA type mRNA
GC content 0.61
exon number 1
gene id AMCG00021381
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 16110416 ~ 16110859 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAAGCTTTGCAACAGACGCAGGGAGCTCGGCCCCCTCTGTGCTGTGATAGGTCCATGCCTGAGCGCTGGCCCCATTACAGCCAATCGGTGTAGGGCACTCTGCTGTGACGGGGAGGGCGGGGAGACGGTGGCGTTGGTGGTGAGTGGGGGGGTTCACGTTCGTTACGCTCTACGTCAGCGTGGCGTGAATGGAAACCTGTCCAAGATGGCGGCGACCACGGAAAGCAGCAATGCTGGGGCTGGAAGCAAGCGAAAACACTTGGGGATCCCCGAGGCTGTGTTTGTGGTGAGGAGAAAACACCGATCCGTCGTGTCTCGGTTGGGACGGTGCCGGGGCGGAGGGGTTGGCGATCTGTGGGAGCGAGTACGGCGGAGGTATCAGTCCAGTCAGGGAGGAGTGTCCGTTACTACGGCCGGGACTCGCATCCTTAAAAGGCGTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU106784 lncRNA upstream 187695 15920739 ~ 15922721 (+) True G85552
TU106723 lncRNA upstream 354984 15753082 ~ 15755432 (+) True G85507
TU106713 lncRNA upstream 533898 15575549 ~ 15576518 (+) True G85497
TU106625 lncRNA upstream 543590 15515453 ~ 15566826 (+) True G85426
TU106874 lncRNA downstream 29664 16140523 ~ 16169886 (+) True G85623
TU106936 lncRNA downstream 178890 16289749 ~ 16292193 (+) True G85674
TU107030 lncRNA downstream 436798 16547657 ~ 16549345 (+) True G85746
TU107041 lncRNA downstream 458588 16569447 ~ 16569650 (+) True G85757
TU107042 lncRNA downstream 461334 16572193 ~ 16572868 (+) True G85758
AMCG00021383 mRNA upstream 2734 16106498 ~ 16107682 (+) True AMCG00021383
AMCG00021384 mRNA upstream 7207 16102973 ~ 16103209 (+) True AMCG00021384
AMCG00021373 mRNA upstream 36795 16063499 ~ 16073621 (+) True AMCG00021373
AMCG00021375 mRNA upstream 51088 16048516 ~ 16059328 (+) True AMCG00021375
AMCG00021372 mRNA upstream 72632 16022358 ~ 16037784 (+) True AMCG00021372
AMCG00021379 mRNA downstream 449 16111308 ~ 16113420 (+) True AMCG00021379
AMCG00021377 mRNA downstream 14662 16125521 ~ 16131258 (+) True AMCG00021377
AMCG00021378 mRNA downstream 27992 16138851 ~ 16166160 (+) True AMCG00021378
AMCG00021380 mRNA downstream 65503 16176362 ~ 16181822 (+) True AMCG00021380
AMCG00021390 mRNA downstream 72964 16183823 ~ 16184805 (+) True AMCG00021390
TU106850 other upstream 36798 16063600 ~ 16073618 (+) False AMCG00021373
TU105723 other upstream 4009709 12075345 ~ 12100707 (+) True G84749
TU105614 other upstream 5123242 10963148 ~ 10987174 (+) True G84657
TU105325 other upstream 6686997 9416267 ~ 9423419 (+) True G84425
TU105166 other upstream 7477006 8631727 ~ 8633410 (+) True G84301
TU107049 other downstream 479322 16590181 ~ 16592973 (+) True G85764
TU107079 other downstream 545785 16656644 ~ 16661882 (+) True G85787
TU107080 other downstream 545785 16656644 ~ 16714038 (+) False G85787
TU107177 other downstream 887018 16997877 ~ 17004131 (+) True G85869
TU107506 other downstream 2137631 18248490 ~ 18249686 (+) True G86121

Expression Profile