RNA id: AMCG00021437


Basic Information

Item Value
RNA id AMCG00021437
length 495
RNA type mRNA
GC content 0.58
exon number 4
gene id AMCG00021437
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17456860 ~ 17475633 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAACAGCTGCTCAAAATCAAAGATAAGCAAGGGTCAGGGCAGTGCCACAGCCCAGAACAGCAACAGTGCCACAGATCAGAGCAGCATTGCCACAGcccagaacagcagcagcagcactgccaCAGCCCAGAACAGTCGCCAAAGCTCCAAAGCCACATTTGACACCTCGATCAGGTTACCGTCTGGGTCCCGGAAGTACAGAGAGGTGATGGGCCCCACTGCGCCCGTCCTGGCCACCGGACCCTCCTCCACTGCCACCCCACAGGCCTgcaggcacagacacacaCTAGTGCGCAGTGGACTCCCTGCAGTCCGATTCTGCAGCTCCAGCCCGAAGCCAGTCCGGATCTGCAGTCTGGACCACTTGGTTCTGACGGTGCGCAGCGTGCCTGAGTCCCTGGCTTTCTACTCCTCTGTGCTGGGCATGGAGGTCATCACCTTCCAGACGTATCTGCAGGAAAAGCACTATTGCCTACTTTTTCGCAAATTGTAA

Function

GO: NA

KEGG:

id description
ko04975 Fat digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107288 lncRNA downstream 38312 17417997 ~ 17418548 (-) True G85952
TU107266 lncRNA downstream 165999 17248967 ~ 17290861 (-) True G85938
TU107220 lncRNA downstream 328195 17128464 ~ 17128665 (-) True G85909
TU107216 lncRNA downstream 368025 17087933 ~ 17088835 (-) True G85905
TU107215 lncRNA downstream 369142 17086722 ~ 17087718 (-) True G85904
TU107323 lncRNA upstream 1071 17476704 ~ 17476904 (-) True G85985
TU107339 lncRNA upstream 37564 17513197 ~ 17513620 (-) True G86000
TU107353 lncRNA upstream 51120 17526753 ~ 17527139 (-) True G86012
TU107354 lncRNA upstream 56975 17532608 ~ 17532829 (-) True G86013
TU107370 lncRNA upstream 105609 17581242 ~ 17585441 (-) True AMCG00021444
AMCG00021435 mRNA downstream 157234 17286249 ~ 17299626 (-) True AMCG00021435
AMCG00021432 mRNA downstream 176059 17249632 ~ 17280801 (-) True AMCG00021432
AMCG00021425 mRNA downstream 414353 17035957 ~ 17042507 (-) True AMCG00021425
AMCG00021427 mRNA downstream 433721 17022545 ~ 17023139 (-) True AMCG00021427
AMCG00021426 mRNA downstream 435585 17003369 ~ 17021275 (-) True AMCG00021426
AMCG00021446 mRNA upstream 36929 17512562 ~ 17517667 (-) True AMCG00021446
AMCG00021445 mRNA upstream 42748 17518381 ~ 17539713 (-) True AMCG00021445
AMCG00021444 mRNA upstream 105694 17581327 ~ 17585399 (-) False AMCG00021444
AMCG00021447 mRNA upstream 112905 17588538 ~ 17589461 (-) True AMCG00021447
AMCG00021448 mRNA upstream 140672 17616305 ~ 17632305 (-) True AMCG00021448
TU107289 other downstream 33442 17419604 ~ 17423418 (-) True G85953
TU107277 other downstream 153390 17298880 ~ 17303470 (-) False AMCG00021435
TU107075 other downstream 807035 16647139 ~ 16649825 (-) False AMCG00021412
TU107077 other downstream 807035 16647139 ~ 16649825 (-) True AMCG00021412
TU106928 other downstream 1214205 16241004 ~ 16242655 (-) False AMCG00021387
TU107350 other upstream 71529 17547162 ~ 17552766 (-) True G86010
TU107351 other upstream 71529 17547162 ~ 17552264 (-) False G86010
TU107397 other upstream 450466 17926099 ~ 17926708 (-) True G86049
TU107532 other upstream 772028 18247661 ~ 18248894 (-) True AMCG00021460
TU107653 other upstream 1345900 18821533 ~ 18909908 (-) True G86241

Expression Profile