Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021480 |
| length | 861 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 5 |
| gene id | AMCG00021480 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 19164678 ~ 19180521 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009116 | nucleoside metabolic process | biological_process |
| GO:0004731 | purine-nucleoside phosphorylase activity | molecular_function |
| id | description |
|---|---|
| K03783 | punA, PNP; purine-nucleoside phosphorylase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU107705 | lncRNA | upstream | 11396 | 19153015 ~ 19153282 (+) | True | G86284 |
| TU107691 | lncRNA | upstream | 109575 | 19047049 ~ 19055103 (+) | False | AMCG00021472 |
| TU107641 | lncRNA | upstream | 484802 | 18679113 ~ 18679876 (+) | True | G86229 |
| TU107639 | lncRNA | upstream | 500145 | 18663193 ~ 18664533 (+) | True | G86227 |
| TU107625 | lncRNA | upstream | 546122 | 18615170 ~ 18618556 (+) | True | G86217 |
| TU107735 | lncRNA | downstream | 43932 | 19224453 ~ 19226768 (+) | True | G86309 |
| TU107751 | lncRNA | downstream | 77937 | 19258458 ~ 19258855 (+) | True | G86323 |
| TU107802 | lncRNA | downstream | 211576 | 19392097 ~ 19394874 (+) | True | G86367 |
| TU107824 | lncRNA | downstream | 268208 | 19448729 ~ 19449107 (+) | True | G86387 |
| TU107871 | lncRNA | downstream | 405468 | 19585989 ~ 19587369 (+) | True | G86419 |
| AMCG00021475 | mRNA | upstream | 45110 | 19107777 ~ 19119568 (+) | True | AMCG00021475 |
| AMCG00021472 | mRNA | upstream | 109579 | 19047171 ~ 19055099 (+) | True | AMCG00021472 |
| AMCG00021473 | mRNA | upstream | 118828 | 19031291 ~ 19045850 (+) | True | AMCG00021473 |
| AMCG00021466 | mRNA | upstream | 608278 | 18555792 ~ 18556400 (+) | True | AMCG00021466 |
| AMCG00021465 | mRNA | upstream | 624530 | 18488903 ~ 18540148 (+) | True | AMCG00021465 |
| AMCG00021478 | mRNA | downstream | 22357 | 19202878 ~ 19220274 (+) | True | AMCG00021478 |
| AMCG00021479 | mRNA | downstream | 51607 | 19232128 ~ 19247678 (+) | True | AMCG00021479 |
| AMCG00021485 | mRNA | downstream | 100530 | 19281051 ~ 19294779 (+) | True | AMCG00021485 |
| AMCG00021484 | mRNA | downstream | 119015 | 19299536 ~ 19307124 (+) | True | AMCG00021484 |
| AMCG00021488 | mRNA | downstream | 161299 | 19341820 ~ 19342824 (+) | True | AMCG00021488 |
| TU107506 | other | upstream | 914992 | 18248490 ~ 18249686 (+) | True | G86121 |
| TU107177 | other | upstream | 2160547 | 16997877 ~ 17004131 (+) | True | G85869 |
| TU107080 | other | upstream | 2450640 | 16656644 ~ 16714038 (+) | False | G85787 |
| TU107079 | other | upstream | 2502796 | 16656644 ~ 16661882 (+) | True | G85787 |
| TU107049 | other | upstream | 2571705 | 16590181 ~ 16592973 (+) | True | G85764 |
| TU107757 | other | downstream | 99244 | 19279765 ~ 19282915 (+) | False | AMCG00021485 |
| TU107857 | other | downstream | 319279 | 19499800 ~ 19501242 (+) | True | G86407 |
| TU108101 | other | downstream | 1162089 | 20342610 ~ 20401249 (+) | False | G86601 |
| TU108117 | other | downstream | 1197902 | 20378423 ~ 20380424 (+) | True | G86616 |
| TU108100 | other | downstream | 1218405 | 20398926 ~ 20401249 (+) | True | G86601 |
