Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021527 |
| length | 879 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 11 |
| gene id | AMCG00021527 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 20506025 ~ 20524326 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K23288 | VPS50; syndetin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU108173 | lncRNA | upstream | 4722 | 20500786 ~ 20501303 (+) | True | G86665 |
| TU108136 | lncRNA | upstream | 43034 | 20462255 ~ 20462991 (+) | True | G86633 |
| TU108128 | lncRNA | upstream | 96367 | 20408404 ~ 20409658 (+) | True | G86625 |
| TU108113 | lncRNA | upstream | 134489 | 20370645 ~ 20371536 (+) | True | AMCG00021517 |
| TU108061 | lncRNA | upstream | 207243 | 20298462 ~ 20298782 (+) | True | G86573 |
| TU108195 | lncRNA | downstream | 88300 | 20612626 ~ 20614365 (+) | True | G86685 |
| TU108197 | lncRNA | downstream | 96180 | 20620506 ~ 20620721 (+) | True | G86687 |
| TU108205 | lncRNA | downstream | 174888 | 20699214 ~ 20702457 (+) | True | G86695 |
| TU108243 | lncRNA | downstream | 376701 | 20901027 ~ 20902855 (+) | True | G86727 |
| TU108236 | lncRNA | downstream | 384491 | 20908817 ~ 20911992 (+) | False | AMCG00021539 |
| AMCG00021526 | mRNA | upstream | 12851 | 20481211 ~ 20493174 (+) | True | AMCG00021526 |
| AMCG00021522 | mRNA | upstream | 112764 | 20389757 ~ 20393261 (+) | True | AMCG00021522 |
| AMCG00021517 | mRNA | upstream | 135009 | 20368153 ~ 20371016 (+) | False | AMCG00021517 |
| AMCG00021518 | mRNA | upstream | 166287 | 20314180 ~ 20339738 (+) | True | AMCG00021518 |
| AMCG00021513 | mRNA | upstream | 231642 | 20214149 ~ 20274383 (+) | True | AMCG00021513 |
| AMCG00021530 | mRNA | downstream | 7842 | 20532168 ~ 20550930 (+) | True | AMCG00021530 |
| AMCG00021529 | mRNA | downstream | 30167 | 20554493 ~ 20563626 (+) | True | AMCG00021529 |
| AMCG00021528 | mRNA | downstream | 53367 | 20577693 ~ 20589296 (+) | True | AMCG00021528 |
| AMCG00021532 | mRNA | downstream | 178778 | 20703104 ~ 20721264 (+) | True | AMCG00021532 |
| AMCG00021535 | mRNA | downstream | 210388 | 20734714 ~ 20782173 (+) | True | AMCG00021535 |
| TU108101 | other | upstream | 104776 | 20342610 ~ 20401249 (+) | False | G86601 |
| TU108100 | other | upstream | 104776 | 20398926 ~ 20401249 (+) | True | G86601 |
| TU108117 | other | upstream | 125601 | 20378423 ~ 20380424 (+) | True | G86616 |
| TU107857 | other | upstream | 1004783 | 19499800 ~ 19501242 (+) | True | G86407 |
| TU107757 | other | upstream | 1223110 | 19279765 ~ 19282915 (+) | False | AMCG00021485 |
| TU108198 | other | downstream | 143144 | 20667470 ~ 20667927 (+) | True | G86688 |
| TU108360 | other | downstream | 574093 | 21098419 ~ 21109368 (+) | True | AMCG00021550 |
| TU108358 | other | downstream | 574266 | 21098592 ~ 21109368 (+) | False | AMCG00021550 |
| TU108371 | other | downstream | 634298 | 21158624 ~ 21165032 (+) | False | AMCG00021551 |
| TU108414 | other | downstream | 705526 | 21229852 ~ 21231488 (+) | True | AMCG00021561 |
