Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021532 |
| length | 1359 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 9 |
| gene id | AMCG00021532 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 20703104 ~ 20721264 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0050660 | flavin adenine dinucleotide binding | molecular_function |
| GO:0003995 | acyl-CoA dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| K11731 | atuD; citronellyl-CoA dehydrogenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU108205 | lncRNA | upstream | 647 | 20699214 ~ 20702457 (+) | True | G86695 |
| TU108197 | lncRNA | upstream | 82383 | 20620506 ~ 20620721 (+) | True | G86687 |
| TU108195 | lncRNA | upstream | 88739 | 20612626 ~ 20614365 (+) | True | G86685 |
| TU108178 | lncRNA | upstream | 155694 | 20508508 ~ 20547410 (+) | True | G86668 |
| TU108173 | lncRNA | upstream | 201801 | 20500786 ~ 20501303 (+) | True | G86665 |
| TU108243 | lncRNA | downstream | 179763 | 20901027 ~ 20902855 (+) | True | G86727 |
| TU108236 | lncRNA | downstream | 187553 | 20908817 ~ 20911992 (+) | False | AMCG00021539 |
| TU108340 | lncRNA | downstream | 313838 | 21035102 ~ 21038425 (+) | True | G86800 |
| TU108380 | lncRNA | downstream | 450826 | 21172090 ~ 21175659 (+) | True | G86833 |
| TU108418 | lncRNA | downstream | 515837 | 21237101 ~ 21238163 (+) | True | G86859 |
| AMCG00021528 | mRNA | upstream | 113808 | 20577693 ~ 20589296 (+) | True | AMCG00021528 |
| AMCG00021529 | mRNA | upstream | 139478 | 20554493 ~ 20563626 (+) | True | AMCG00021529 |
| AMCG00021530 | mRNA | upstream | 152174 | 20532168 ~ 20550930 (+) | True | AMCG00021530 |
| AMCG00021527 | mRNA | upstream | 178778 | 20506025 ~ 20524326 (+) | True | AMCG00021527 |
| AMCG00021526 | mRNA | upstream | 209930 | 20481211 ~ 20493174 (+) | True | AMCG00021526 |
| AMCG00021535 | mRNA | downstream | 13450 | 20734714 ~ 20782173 (+) | True | AMCG00021535 |
| AMCG00021537 | mRNA | downstream | 76434 | 20797698 ~ 20827291 (+) | True | AMCG00021537 |
| AMCG00021536 | mRNA | downstream | 108589 | 20829853 ~ 20842424 (+) | True | AMCG00021536 |
| AMCG00021541 | mRNA | downstream | 153859 | 20875123 ~ 20886781 (+) | True | AMCG00021541 |
| AMCG00021540 | mRNA | downstream | 169626 | 20890890 ~ 20898448 (+) | True | AMCG00021540 |
| TU108198 | other | upstream | 35177 | 20667470 ~ 20667927 (+) | True | G86688 |
| TU108101 | other | upstream | 301855 | 20342610 ~ 20401249 (+) | False | G86601 |
| TU108100 | other | upstream | 301855 | 20398926 ~ 20401249 (+) | True | G86601 |
| TU108117 | other | upstream | 322680 | 20378423 ~ 20380424 (+) | True | G86616 |
| TU107857 | other | upstream | 1201862 | 19499800 ~ 19501242 (+) | True | G86407 |
| TU108360 | other | downstream | 377155 | 21098419 ~ 21109368 (+) | True | AMCG00021550 |
| TU108358 | other | downstream | 377328 | 21098592 ~ 21109368 (+) | False | AMCG00021550 |
| TU108371 | other | downstream | 437360 | 21158624 ~ 21165032 (+) | False | AMCG00021551 |
| TU108414 | other | downstream | 508588 | 21229852 ~ 21231488 (+) | True | AMCG00021561 |
| TU108415 | other | downstream | 508588 | 21229852 ~ 21231488 (+) | False | AMCG00021561 |
