RNA id: AMCG00021545


Basic Information

Item Value
RNA id AMCG00021545
length 1438
RNA type mRNA
GC content 0.52
exon number 9
gene id AMCG00021545
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20899071 ~ 20902765 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGAGGGAGAAGCTCCGCAGGACAGACGGGACACGCACCATGGGGAGGCTCGCAGTGCTGGTCGCGGTGGCCGCAGGGCTGTTAGCGCTGTTTGGAGAGAGATTCGTGCATTTAAGGAAAAGGTTATTGGCTTCCAGAGAAATCCAACAAAATCATCTTCCCAACTGTGAGCTCATTAAAGGTCTTGATTACGGATCTGAAGACATCACCGTGCTGCCCAATGGCCTGGCTCTGATCAGCACGGGGTTGAAGTATCCTGGTACCCCCCACTTTTCCGAGGAACCTGGGAAGATCTATGTTCTGGACCTGCACGCGAATCATCTCAAACCAGTCGAGCTGAGGGTGAGCCGCGGGTTCGATCTGGATTCGTTCAATCCACATGGAATCAGCGTTTACATCGACGAGACGGATCACACGGTCTACCTGTTTGTGGTCAATCACCCTAACTCGGAGAGCACGGTGGAAAACTTCAGATACAACGAGGAGGACAACTCCATCGCTCACCTGAAAACCATCAAACACAAACTTCTTCATCATGTCAATGACATCGTGGCGGTCGGACCAGAGAGCTTCTATGCGACGAACGATCACTACTTTTCCCACGAGCTTCTGCGCGCTGTGGAGATGTTCCTGGATCTGCCCTGGTGCGACGTGATCTATTACACCCCCGAGGGAGTGCGGGAGGTGGCAGCGGGCTTTAACTCCGTCAACGGGATCAACATCTCCCCCGATAACAAGTACATCTATGTTGCGGATATTCTGGCCCAAACTATCCATGTGATGGAGATCCAGAAAGACAAGACCTTGACGTCTGTGAAGGCTGTCCAAGTGGGGTCCCTGCCTGACAATATCGAGGTGGACCGGGTCACCGGAGACGTGTGGCTGGGGTGCCACCCGAACGCTGCAAAAATGGCCCCCTATGATCCTCAAAATCCCCCTGGATCTGAGGTGATCCAGATTAAGCACATTCACTCGGAGACGCCTGAGGTGAGGCAGGTGTACGCGGACGACGGCAGCGTGATCCAGGGCTCGTCCATCGCCGTTGCCTACCAGGGGAGGCTGCTGATCGgctctgtgtttcacaaaatgctCATCTGTGATCTGGAATAGCTTTCTCTGTTCGGAGGGGTGGGGAATGACCTGTGAACGACCCGGCAATGTGAACGAAGGCCGGTGCTGCAGACTGGGACGTCGTGAGGACCTTGCTAACAGAACTGGTCGAGGTGGGGAGAATTGTGACGTGTGCCTTAAGGCTGCGATTACGGGAGACCCTGTGAGCCGTTTCTCTGCAAATAAAGCCATATCAAATCCTCAAcctgtgtttaattatatatatatatataaacacttatATTTTTCCTCCctcaatgtattttgtactcAGCGTAAATACACAACTTTAAACTCTGAGTgcatggtttgttttcaatggCTTTGCA

Function

GO: NA

KEGG:

id description
K01045 PON; arylesterase / paraoxonase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108259 lncRNA downstream 44777 20825630 ~ 20854294 (-) False G86739
TU108260 lncRNA downstream 68149 20828259 ~ 20830922 (-) True G86740
TU108257 lncRNA downstream 71774 20824022 ~ 20827297 (-) True G86739
TU108256 lncRNA downstream 75107 20823000 ~ 20823964 (-) True G86738
TU108253 lncRNA downstream 76468 20821632 ~ 20822603 (-) True G86736
TU108398 lncRNA upstream 272941 21175706 ~ 21184318 (-) True G86848
TU108400 lncRNA upstream 284003 21186768 ~ 21188838 (-) True G86849
TU108401 lncRNA upstream 287074 21189839 ~ 21190932 (-) True G86850
TU108442 lncRNA upstream 388608 21291373 ~ 21293903 (-) True G86881
TU108455 lncRNA upstream 613267 21516032 ~ 21516234 (-) True G86893
AMCG00021538 mRNA downstream 43297 20843663 ~ 20855774 (-) True AMCG00021538
AMCG00021534 mRNA downstream 174249 20722370 ~ 20724822 (-) False AMCG00021534
AMCG00021533 mRNA downstream 205847 20689347 ~ 20693224 (-) True AMCG00021533
AMCG00021531 mRNA downstream 260115 20618070 ~ 20638956 (-) True AMCG00021531
AMCG00021525 mRNA downstream 438793 20444543 ~ 20460278 (-) True AMCG00021525
AMCG00021546 mRNA upstream 13918 20916683 ~ 20926715 (-) True AMCG00021546
AMCG00021549 mRNA upstream 80835 20983600 ~ 21020401 (-) True AMCG00021549
AMCG00021548 mRNA upstream 132098 21034863 ~ 21038425 (-) True AMCG00021548
AMCG00021552 mRNA upstream 184110 21086875 ~ 21094522 (-) True AMCG00021552
AMCG00021553 mRNA upstream 206989 21109754 ~ 21140683 (-) True AMCG00021553
TU108218 other downstream 174191 20721884 ~ 20724880 (-) True AMCG00021534
TU108155 other downstream 501288 20395612 ~ 20397783 (-) True G86649
TU108146 other downstream 538816 20358301 ~ 20360255 (-) True G86640
TU108097 other downstream 563767 20329422 ~ 20335304 (-) True G86600
TU107835 other downstream 1430338 19466060 ~ 19468733 (-) False AMCG00021495
TU108350 other upstream 161093 21063858 ~ 21083570 (-) True G86808
TU108883 other upstream 2252422 23155187 ~ 23160977 (-) False AMCG00021619
TU108932 other upstream 2435486 23338251 ~ 23338484 (-) True G87263
TU109433 other upstream 4500885 25403650 ~ 25406538 (-) True G87674
TU109596 other upstream 5002679 25905444 ~ 25908005 (-) True G87806

Expression Profile