RNA id: AMCG00021569



Basic Information


Item Value
RNA id AMCG00021569
length 261
RNA type mRNA
GC content 0.50
exon number 3
gene id AMCG00021569
representative False

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 21666402 ~ 21671315 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGTCACTGTGTCTAAAAATAAACCTGCTGTTCTTCGGGAAGGAGGGATGTTGTTTAAAAGTGCAGCAGTGGAGAAACCCTCTGAAAGCTGGTGCTGCTCGATTGAATTGGCCGCCCACCGGCTGAGGGTGAAGCTGCTGTTTTACTATCATTTCACGCAGGCTTTAAATGCGGGCAAAAAGCCAAAGAAGCCCCAGAGACGACAGAACAACAGACTGAAGCCTTTGACCTTGGCATACGACGGCGACGCGGACATGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108455 lncRNA downstream 152694 21516032 ~ 21516234 (-) True G86893
TU108442 lncRNA downstream 375025 21291373 ~ 21293903 (-) True G86881
TU108401 lncRNA downstream 477996 21189839 ~ 21190932 (-) True G86850
TU108400 lncRNA downstream 480090 21186768 ~ 21188838 (-) True G86849
TU108398 lncRNA downstream 484610 21175706 ~ 21184318 (-) True G86848
TU108491 lncRNA upstream 114736 21784876 ~ 21785134 (-) True G86925
TU108574 lncRNA upstream 460666 22130806 ~ 22188140 (-) True G86997
TU108699 lncRNA upstream 958459 22628599 ~ 22628891 (-) True G87092
TU108737 lncRNA upstream 1020468 22690608 ~ 22690889 (-) True G87116
TU108813 lncRNA upstream 1337254 23007394 ~ 23014782 (-) True G87181
AMCG00021564 mRNA downstream 358029 21295597 ~ 21310899 (-) True AMCG00021564
AMCG00021558 mRNA downstream 427837 21239074 ~ 21241091 (-) True AMCG00021558
AMCG00021559 mRNA downstream 431464 21232931 ~ 21237464 (-) True AMCG00021559
AMCG00021562 mRNA downstream 441121 21207696 ~ 21227807 (-) True AMCG00021562
AMCG00021557 mRNA downstream 462983 21195595 ~ 21205945 (-) True AMCG00021557
AMCG00021568 mRNA upstream 4151 21674291 ~ 21761907 (-) True AMCG00021568
AMCG00021572 mRNA upstream 165883 21836023 ~ 21855452 (-) True AMCG00021572
AMCG00021577 mRNA upstream 301149 21971289 ~ 21992069 (-) True AMCG00021577
AMCG00021576 mRNA upstream 331539 22001679 ~ 22012233 (-) True AMCG00021576
AMCG00021580 mRNA upstream 350845 22020985 ~ 22026204 (-) True AMCG00021580
TU108350 other downstream 585358 21063858 ~ 21083570 (-) True G86808
TU108218 other downstream 944048 20721884 ~ 20724880 (-) True AMCG00021534
TU108155 other downstream 1271145 20395612 ~ 20397783 (-) True G86649
TU108146 other downstream 1308673 20358301 ~ 20360255 (-) True G86640
TU108097 other downstream 1333624 20329422 ~ 20335304 (-) True G86600
TU108883 other upstream 1485047 23155187 ~ 23160977 (-) False AMCG00021619
TU108932 other upstream 1668111 23338251 ~ 23338484 (-) True G87263
TU109433 other upstream 3733510 25403650 ~ 25406538 (-) True G87674
TU109596 other upstream 4235304 25905444 ~ 25908005 (-) True G87806
TU109647 other upstream 4421114 26091254 ~ 26096784 (-) True AMCG00021700

Expression Profile