RNA id: AMCG00021571



Basic Information


Item Value
RNA id AMCG00021571
length 507
RNA type mRNA
GC content 0.59
exon number 3
gene id AMCG00021571
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 21832823 ~ 21834923 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGCTGCAGAGAAGTTTCCACAGGATCTCTGCTCTGTGAACAGGTCACCAGCCGTGAGGGGAACATGGGTCTGTGGCACAGCTGTGCGGCTCTGGCGAGGATGCTGCTCTTCTTGGCGTccctgtgcatgtgtgtgtctgtgtgcgatGGCCGGTCAGAGGTGTCCAGAGGGGTCGTCATTCCCTTCGTATTTGATGCAAAAGCTACTTGTGACCCACCGTGTCGTCATGCAGGGCTCTGCATCAGGAACAATACCTGCTTCTGCTCCAAGGGCTACGAAGGGGAGCTCTGCCAGTATGCGATCTGTCCTCAGGGATGTAGGAACGGCGGGAGCTGTGTGGCCCCTGGCATCTGCAGCTGTCCCGAGGGCTGGCTCGGGGGGGCGTGCCATATTGCTGTGTGCACCCAGCCTTGTCTCCATGGAGGGAAATGTGTCGCGCCCCACACGTGCCGGTGCCGTGGCCCTTACTCTGGGCCCCAGTGCAGAGAGAAGAAGAAGCAATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108467 lncRNA upstream 194307 21638276 ~ 21638516 (+) True G86905
TU108454 lncRNA upstream 316580 21516033 ~ 21516243 (+) True G86892
TU108445 lncRNA upstream 535043 21295531 ~ 21297780 (+) True G86884
TU108424 lncRNA upstream 575634 21241666 ~ 21257189 (+) True AMCG00021560
TU108605 lncRNA downstream 436614 22271537 ~ 22281458 (+) True AMCG00021591
TU108617 lncRNA downstream 468643 22303566 ~ 22306888 (+) True G87030
TU108691 lncRNA downstream 752291 22587214 ~ 22588925 (+) True G87086
TU108698 lncRNA downstream 793697 22628620 ~ 22628886 (+) True G87091
TU108724 lncRNA downstream 871976 22706899 ~ 22711120 (+) False AMCG00021602
AMCG00021570 mRNA upstream 4603 21814970 ~ 21828220 (+) True AMCG00021570
AMCG00021567 mRNA upstream 172950 21657542 ~ 21659873 (+) True AMCG00021567
AMCG00021566 mRNA upstream 227760 21574050 ~ 21605063 (+) True AMCG00021566
AMCG00021565 mRNA upstream 471221 21360168 ~ 21361602 (+) True AMCG00021565
AMCG00021563 mRNA upstream 541731 21269203 ~ 21291092 (+) True AMCG00021563
AMCG00021573 mRNA downstream 35730 21870653 ~ 21872068 (+) True AMCG00021573
AMCG00021574 mRNA downstream 43233 21878156 ~ 21897029 (+) True AMCG00021574
AMCG00021575 mRNA downstream 64973 21899896 ~ 21902053 (+) True AMCG00021575
AMCG00021585 mRNA downstream 401055 22235978 ~ 22237376 (+) True AMCG00021585
AMCG00021584 mRNA downstream 413328 22248251 ~ 22265190 (+) True AMCG00021584
TU108421 other upstream 596743 21235070 ~ 21236080 (+) True G86861
TU108414 other upstream 601335 21229852 ~ 21231488 (+) True AMCG00021561
TU108415 other upstream 601335 21229852 ~ 21231488 (+) False AMCG00021561
TU108371 other upstream 667791 21158624 ~ 21165032 (+) False AMCG00021551
TU108358 other upstream 723455 21098592 ~ 21109368 (+) False AMCG00021550
TU109135 other downstream 2339586 24174509 ~ 24177990 (+) True AMCG00021656
TU109403 other downstream 3441853 25276776 ~ 25365977 (+) False AMCG00021682
TU109668 other downstream 4317145 26152068 ~ 26197076 (+) False AMCG00021703
TU110128 other downstream 6943392 28778315 ~ 28778733 (+) True G88238
TU110172 other downstream 7225964 29060887 ~ 29065339 (+) True G88276

Expression Profile