RNA id: AMCG00021579



Basic Information


Item Value
RNA id AMCG00021579
length 339
RNA type mRNA
GC content 0.44
exon number 4
gene id AMCG00021579
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 22063544 ~ 22066573 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGATCACCAAAGACTCAACCAAGAAGCTCAAAGATGTTCTTCAGGAGTTTCACGGAGACGGGGTGCTGGCGAAGTACAACCCTGAGGAGGAGATTGACTTTGAAGGCTTCAAACTGTTCATGAAGACATTCTTGGAAACGGAGCTCCCTGAGGACTTTTGCCAACATCTTTTTGTGTCATTTCGTAATAAGTTCTCCCACCCCAGCCCCTCCACGTCAGAAAAGACACGTGTACTGAGTAAGGAAAACCATTTCGAGACCAATTTCATGGCAACtGTCACCTACACAGACAACAATACATCCGTCACTtctgattatattttgtatttcaggtCTTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108491 lncRNA downstream 278410 21784876 ~ 21785134 (-) True G86925
TU108475 lncRNA downstream 392229 21666402 ~ 21671315 (-) True AMCG00021569
TU108455 lncRNA downstream 547310 21516032 ~ 21516234 (-) True G86893
TU108442 lncRNA downstream 769641 21291373 ~ 21293903 (-) True G86881
TU108401 lncRNA downstream 872612 21189839 ~ 21190932 (-) True G86850
TU108574 lncRNA upstream 64233 22130806 ~ 22188140 (-) True G86997
TU108699 lncRNA upstream 562026 22628599 ~ 22628891 (-) True G87092
TU108737 lncRNA upstream 624035 22690608 ~ 22690889 (-) True G87116
TU108813 lncRNA upstream 940821 23007394 ~ 23014782 (-) True G87181
TU108827 lncRNA upstream 1009061 23075634 ~ 23076015 (-) True G87193
AMCG00021578 mRNA downstream 5 22034860 ~ 22063539 (-) True AMCG00021578
AMCG00021580 mRNA downstream 37340 22020985 ~ 22026204 (-) True AMCG00021580
AMCG00021576 mRNA downstream 51311 22001679 ~ 22012233 (-) True AMCG00021576
AMCG00021577 mRNA downstream 71475 21971289 ~ 21992069 (-) True AMCG00021577
AMCG00021572 mRNA downstream 208092 21836023 ~ 21855452 (-) True AMCG00021572
AMCG00021583 mRNA upstream 40434 22107007 ~ 22114674 (-) True AMCG00021583
AMCG00021582 mRNA upstream 60904 22127477 ~ 22132117 (-) True AMCG00021582
AMCG00021581 mRNA upstream 69211 22135784 ~ 22153433 (-) True AMCG00021581
AMCG00021587 mRNA upstream 134529 22201102 ~ 22226742 (-) True AMCG00021587
AMCG00021586 mRNA upstream 161651 22228224 ~ 22231184 (-) True AMCG00021586
TU108350 other downstream 979974 21063858 ~ 21083570 (-) True G86808
TU108218 other downstream 1338664 20721884 ~ 20724880 (-) True AMCG00021534
TU108155 other downstream 1665761 20395612 ~ 20397783 (-) True G86649
TU108146 other downstream 1703289 20358301 ~ 20360255 (-) True G86640
TU108097 other downstream 1728240 20329422 ~ 20335304 (-) True G86600
TU108883 other upstream 1088614 23155187 ~ 23160977 (-) False AMCG00021619
TU108932 other upstream 1271678 23338251 ~ 23338484 (-) True G87263
TU109433 other upstream 3337077 25403650 ~ 25406538 (-) True G87674
TU109596 other upstream 3838871 25905444 ~ 25908005 (-) True G87806
TU109647 other upstream 4024681 26091254 ~ 26096784 (-) True AMCG00021700

Expression Profile