RNA id: AMCG00021606


Basic Information

Item Value
RNA id AMCG00021606
length 222
RNA type mRNA
GC content 0.62
exon number 1
gene id AMCG00021606
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 22901304 ~ 22901525 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATCGCCGAGGCGCGGCTCAAAGACCTCACCCCCGCCCTGCCCGTGCTGTACCTCCGAGCCATTCCCCTGGACCGGCAGGAGCTGAAGAACGTGTACGAGTGTCCCGTCTACAAGACCAAGGCCCGCGGACCCACCTACATCTGGACCTTCAACCTCAAGACCAAAGAGAAGCCGGCCAAGTGGGTGCTGGCAGGAGTGGCGCTGCTCTTGTCCGTTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108724 lncRNA upstream 190184 22706899 ~ 22711120 (+) False AMCG00021602
TU108698 lncRNA upstream 272418 22628620 ~ 22628886 (+) True G87091
TU108691 lncRNA upstream 312379 22587214 ~ 22588925 (+) True G87086
TU108617 lncRNA upstream 594416 22303566 ~ 22306888 (+) True G87030
TU108605 lncRNA upstream 619846 22271537 ~ 22281458 (+) True AMCG00021591
TU108800 lncRNA downstream 105869 23007394 ~ 23014831 (+) True G87168
TU108852 lncRNA downstream 243479 23145004 ~ 23146510 (+) False G87215
TU108854 lncRNA downstream 243479 23145004 ~ 23191753 (+) False G87215
TU108853 lncRNA downstream 247489 23149014 ~ 23152348 (+) True G87215
TU108897 lncRNA downstream 296096 23197621 ~ 23197869 (+) True G87233
AMCG00021605 mRNA upstream 859 22842792 ~ 22900445 (+) True AMCG00021605
AMCG00021604 mRNA upstream 61786 22833035 ~ 22839518 (+) True AMCG00021604
AMCG00021602 mRNA upstream 190160 22697164 ~ 22711144 (+) True AMCG00021602
AMCG00021596 mRNA upstream 325457 22540922 ~ 22575847 (+) True AMCG00021596
AMCG00021595 mRNA upstream 374431 22504145 ~ 22526873 (+) True AMCG00021595
AMCG00021617 mRNA downstream 98964 23000489 ~ 23003768 (+) True AMCG00021617
AMCG00021613 mRNA downstream 167335 23068860 ~ 23074075 (+) True AMCG00021613
AMCG00021612 mRNA downstream 174038 23075563 ~ 23080630 (+) True AMCG00021612
AMCG00021611 mRNA downstream 181775 23083300 ~ 23088905 (+) True AMCG00021611
AMCG00021618 mRNA downstream 188007 23089532 ~ 23092868 (+) True AMCG00021618
TU108421 other upstream 1665224 21235070 ~ 21236080 (+) True G86861
TU108414 other upstream 1669816 21229852 ~ 21231488 (+) True AMCG00021561
TU108415 other upstream 1669816 21229852 ~ 21231488 (+) False AMCG00021561
TU108371 other upstream 1736272 21158624 ~ 21165032 (+) False AMCG00021551
TU108358 other upstream 1791936 21098592 ~ 21109368 (+) False AMCG00021550
TU109135 other downstream 1272984 24174509 ~ 24177990 (+) True AMCG00021656
TU109403 other downstream 2375251 25276776 ~ 25365977 (+) False AMCG00021682
TU109668 other downstream 3250543 26152068 ~ 26197076 (+) False AMCG00021703
TU110128 other downstream 5876790 28778315 ~ 28778733 (+) True G88238
TU110172 other downstream 6159362 29060887 ~ 29065339 (+) True G88276

Expression Profile