Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021711 |
| length | 1257 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 7 |
| gene id | AMCG00021711 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 26661019 ~ 26680085 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007416 | synapse assembly | biological_process |
| GO:0006590 | thyroid hormone generation | biological_process |
| GO:0045202 | synapse | cellular_component |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0009986 | cell surface | cellular_component |
| GO:0042043 | neurexin family protein binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109703 | lncRNA | upstream | 91871 | 26565508 ~ 26569148 (+) | False | AMCG00021707 |
| TU109615 | lncRNA | upstream | 566823 | 26091176 ~ 26094196 (+) | True | G87824 |
| TU109567 | lncRNA | upstream | 775316 | 25885446 ~ 25885703 (+) | True | G87786 |
| TU109559 | lncRNA | upstream | 790824 | 25858949 ~ 25870195 (+) | True | AMCG00021693 |
| TU109541 | lncRNA | upstream | 828031 | 25832454 ~ 25832988 (+) | True | G87765 |
| TU109760 | lncRNA | downstream | 30132 | 26710217 ~ 26713476 (+) | True | G87939 |
| TU109766 | lncRNA | downstream | 40824 | 26720909 ~ 26737883 (+) | True | G87942 |
| TU109790 | lncRNA | downstream | 128172 | 26808257 ~ 26810867 (+) | True | G87961 |
| TU109792 | lncRNA | downstream | 132945 | 26813030 ~ 26817282 (+) | True | G87962 |
| TU109837 | lncRNA | downstream | 216640 | 26896725 ~ 26906365 (+) | True | G87993 |
| AMCG00021715 | mRNA | upstream | 17698 | 26640291 ~ 26643321 (+) | True | AMCG00021715 |
| AMCG00021713 | mRNA | upstream | 20914 | 26597621 ~ 26640105 (+) | True | AMCG00021713 |
| AMCG00021712 | mRNA | upstream | 64669 | 26579325 ~ 26596350 (+) | True | AMCG00021712 |
| AMCG00021714 | mRNA | upstream | 84322 | 26575405 ~ 26576697 (+) | True | AMCG00021714 |
| AMCG00021707 | mRNA | upstream | 91876 | 26535093 ~ 26569143 (+) | True | AMCG00021707 |
| AMCG00021717 | mRNA | downstream | 7015 | 26687100 ~ 26700241 (+) | True | AMCG00021717 |
| AMCG00021718 | mRNA | downstream | 70346 | 26750431 ~ 26751588 (+) | True | AMCG00021718 |
| AMCG00021720 | mRNA | downstream | 104034 | 26784119 ~ 26802985 (+) | True | AMCG00021720 |
| AMCG00021721 | mRNA | downstream | 156755 | 26836840 ~ 26844877 (+) | True | AMCG00021721 |
| AMCG00021722 | mRNA | downstream | 169793 | 26849878 ~ 26865877 (+) | True | AMCG00021722 |
| TU109668 | other | upstream | 463943 | 26152068 ~ 26197076 (+) | False | AMCG00021703 |
| TU109403 | other | upstream | 1295042 | 25276776 ~ 25365977 (+) | False | AMCG00021682 |
| TU109135 | other | upstream | 2483029 | 24174509 ~ 24177990 (+) | True | AMCG00021656 |
| TU108421 | other | upstream | 5424939 | 21235070 ~ 21236080 (+) | True | G86861 |
| TU108415 | other | upstream | 5429531 | 21229852 ~ 21231488 (+) | False | AMCG00021561 |
| TU110128 | other | downstream | 2098230 | 28778315 ~ 28778733 (+) | True | G88238 |
| TU110172 | other | downstream | 2380802 | 29060887 ~ 29065339 (+) | True | G88276 |
| TU110265 | other | downstream | 2698490 | 29378575 ~ 29382273 (+) | False | AMCG00021779 |
| TU110267 | other | downstream | 2698490 | 29378575 ~ 29382273 (+) | False | AMCG00021779 |
| TU110433 | other | downstream | 3587317 | 30267402 ~ 30394221 (+) | False | AMCG00021803 |
