Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021718 |
| length | 912 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 3 |
| gene id | AMCG00021718 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 26750431 ~ 26751588 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
| GO:0003143 | embryonic heart tube morphogenesis | biological_process |
| GO:0003002 | regionalization | biological_process |
| GO:0061371 | determination of heart left/right asymmetry | biological_process |
| GO:0005515 | protein binding | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109766 | lncRNA | upstream | 12548 | 26720909 ~ 26737883 (+) | True | G87942 |
| TU109760 | lncRNA | upstream | 36955 | 26710217 ~ 26713476 (+) | True | G87939 |
| TU109703 | lncRNA | upstream | 181283 | 26565508 ~ 26569148 (+) | False | AMCG00021707 |
| TU109615 | lncRNA | upstream | 656235 | 26091176 ~ 26094196 (+) | True | G87824 |
| TU109567 | lncRNA | upstream | 864728 | 25885446 ~ 25885703 (+) | True | G87786 |
| TU109790 | lncRNA | downstream | 56669 | 26808257 ~ 26810867 (+) | True | G87961 |
| TU109792 | lncRNA | downstream | 61442 | 26813030 ~ 26817282 (+) | True | G87962 |
| TU109837 | lncRNA | downstream | 145137 | 26896725 ~ 26906365 (+) | True | G87993 |
| TU109874 | lncRNA | downstream | 305786 | 27057374 ~ 27057611 (+) | True | G88024 |
| TU109875 | lncRNA | downstream | 308594 | 27060182 ~ 27060389 (+) | True | G88025 |
| AMCG00021717 | mRNA | upstream | 50190 | 26687100 ~ 26700241 (+) | True | AMCG00021717 |
| AMCG00021711 | mRNA | upstream | 70346 | 26661019 ~ 26680085 (+) | True | AMCG00021711 |
| AMCG00021715 | mRNA | upstream | 107110 | 26640291 ~ 26643321 (+) | True | AMCG00021715 |
| AMCG00021713 | mRNA | upstream | 110326 | 26597621 ~ 26640105 (+) | True | AMCG00021713 |
| AMCG00021712 | mRNA | upstream | 154081 | 26579325 ~ 26596350 (+) | True | AMCG00021712 |
| AMCG00021720 | mRNA | downstream | 32531 | 26784119 ~ 26802985 (+) | True | AMCG00021720 |
| AMCG00021721 | mRNA | downstream | 85252 | 26836840 ~ 26844877 (+) | True | AMCG00021721 |
| AMCG00021722 | mRNA | downstream | 98290 | 26849878 ~ 26865877 (+) | True | AMCG00021722 |
| AMCG00021726 | mRNA | downstream | 202569 | 26954157 ~ 26978899 (+) | True | AMCG00021726 |
| AMCG00021729 | mRNA | downstream | 249529 | 27001117 ~ 27002570 (+) | True | AMCG00021729 |
| TU109668 | other | upstream | 553355 | 26152068 ~ 26197076 (+) | False | AMCG00021703 |
| TU109403 | other | upstream | 1384454 | 25276776 ~ 25365977 (+) | False | AMCG00021682 |
| TU109135 | other | upstream | 2572441 | 24174509 ~ 24177990 (+) | True | AMCG00021656 |
| TU108421 | other | upstream | 5514351 | 21235070 ~ 21236080 (+) | True | G86861 |
| TU108415 | other | upstream | 5518943 | 21229852 ~ 21231488 (+) | False | AMCG00021561 |
| TU110128 | other | downstream | 2026727 | 28778315 ~ 28778733 (+) | True | G88238 |
| TU110172 | other | downstream | 2309299 | 29060887 ~ 29065339 (+) | True | G88276 |
| TU110265 | other | downstream | 2626987 | 29378575 ~ 29382273 (+) | False | AMCG00021779 |
| TU110267 | other | downstream | 2626987 | 29378575 ~ 29382273 (+) | False | AMCG00021779 |
| TU110433 | other | downstream | 3515814 | 30267402 ~ 30394221 (+) | False | AMCG00021803 |
