RNA id: AMCG00021729



Basic Information


Item Value
RNA id AMCG00021729
length 564
RNA type mRNA
GC content 0.51
exon number 4
gene id AMCG00021729
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 27001117 ~ 27002570 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATTCAGTTGTACGAAGTCTTCCGATCGCCTGAGCACGTGTACTTGGTGCTTGAGCTGGCCTTGCGTGGGAATTTGCGGGAGCATGTCAACACTGTGTCATGGACCAAAGGTAGCCCGGGCCTGGTCGAGAAGGATGCCCGCCGGCTCTTCGGGCAGATAGTCAGTGCTCTGGCGCACTGCCACCACAATCACATCGCTCACAGAGACCtcaaatgtgaaaacatgcttttgGATGCACAGGGATTTGTAAAATTTACAGACTTTGGCTTTGCTAACACATATACAGACAAACGTGCCCTAATGAACACGTTCTGTGGCTCTGTGGCCTACACTGCACCTGAAATCCTACTTGCTTGGCTGTATAGAGGAGAGCAGGCAGACCTGTGGAGCTTGGGAGTGGTACTGTATGCCATGGCTCCCGGAAAGCTTCCTTATCATGAACAACACTCCCGGAAGCTGGTCCACCTCATTAGGAAGGGTCTGCAATTTCCTCAGCCTGTCTCTCCAGGTACCACACACTGCTCCACTTTATACAAGCTGGAAAACATTAGTATACTATGCTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU109837 lncRNA upstream 94752 26896725 ~ 26906365 (+) True G87993
TU109792 lncRNA upstream 183835 26813030 ~ 26817282 (+) True G87962
TU109790 lncRNA upstream 190250 26808257 ~ 26810867 (+) True G87961
TU109766 lncRNA upstream 263234 26720909 ~ 26737883 (+) True G87942
TU109760 lncRNA upstream 287641 26710217 ~ 26713476 (+) True G87939
TU109874 lncRNA downstream 54804 27057374 ~ 27057611 (+) True G88024
TU109875 lncRNA downstream 57612 27060182 ~ 27060389 (+) True G88025
TU109876 lncRNA downstream 59249 27061819 ~ 27062090 (+) True G88026
TU109877 lncRNA downstream 60993 27063563 ~ 27063951 (+) True G88027
TU109893 lncRNA downstream 136257 27138827 ~ 27139443 (+) True G88043
AMCG00021726 mRNA upstream 22218 26954157 ~ 26978899 (+) True AMCG00021726
AMCG00021722 mRNA upstream 135240 26849878 ~ 26865877 (+) True AMCG00021722
AMCG00021721 mRNA upstream 156240 26836840 ~ 26844877 (+) True AMCG00021721
AMCG00021720 mRNA upstream 198132 26784119 ~ 26802985 (+) True AMCG00021720
AMCG00021718 mRNA upstream 249529 26750431 ~ 26751588 (+) True AMCG00021718
AMCG00021730 mRNA downstream 8299 27010869 ~ 27011910 (+) True AMCG00021730
AMCG00021728 mRNA downstream 9352 27011922 ~ 27024907 (+) True AMCG00021728
AMCG00021727 mRNA downstream 23577 27026147 ~ 27054066 (+) True AMCG00021727
AMCG00021733 mRNA downstream 118761 27121331 ~ 27123223 (+) True AMCG00021733
AMCG00021734 mRNA downstream 259269 27261839 ~ 27287320 (+) True AMCG00021734
TU109668 other upstream 804041 26152068 ~ 26197076 (+) False AMCG00021703
TU109403 other upstream 1635140 25276776 ~ 25365977 (+) False AMCG00021682
TU109135 other upstream 2823127 24174509 ~ 24177990 (+) True AMCG00021656
TU108421 other upstream 5765037 21235070 ~ 21236080 (+) True G86861
TU108415 other upstream 5769629 21229852 ~ 21231488 (+) False AMCG00021561
TU110128 other downstream 1775745 28778315 ~ 28778733 (+) True G88238
TU110172 other downstream 2058317 29060887 ~ 29065339 (+) True G88276
TU110265 other downstream 2376005 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other downstream 2376005 29378575 ~ 29382273 (+) False AMCG00021779
TU110433 other downstream 3264832 30267402 ~ 30394221 (+) False AMCG00021803

Expression Profile