RNA id: AMCG00021730



Basic Information


Item Value
RNA id AMCG00021730
length 237
RNA type mRNA
GC content 0.44
exon number 3
gene id AMCG00021730
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 27010869 ~ 27011910 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATCGGTACAATGATTTGAAAGTGTTGTTGAAGAGCTGGGAGTATTCCTTCGtccaggaaaacaaaaggaagcCGAATAAGaacTGTACAAAGAATACAGAGTTCTCAAACAAGAAAGAGAGAATGCAACTGTTGACAGAACCGGCAATGAAAACTCCGGGAAAGAGTGCCAAGATCAGTCCACGAAGGTCCAAACAGCTGAAAAGgaGGCAGATTGTTGGGGAGCTCATCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU109837 lncRNA upstream 104504 26896725 ~ 26906365 (+) True G87993
TU109792 lncRNA upstream 193587 26813030 ~ 26817282 (+) True G87962
TU109790 lncRNA upstream 200002 26808257 ~ 26810867 (+) True G87961
TU109766 lncRNA upstream 272986 26720909 ~ 26737883 (+) True G87942
TU109760 lncRNA upstream 297393 26710217 ~ 26713476 (+) True G87939
TU109874 lncRNA downstream 45464 27057374 ~ 27057611 (+) True G88024
TU109875 lncRNA downstream 48272 27060182 ~ 27060389 (+) True G88025
TU109876 lncRNA downstream 49909 27061819 ~ 27062090 (+) True G88026
TU109877 lncRNA downstream 51653 27063563 ~ 27063951 (+) True G88027
TU109893 lncRNA downstream 126917 27138827 ~ 27139443 (+) True G88043
AMCG00021729 mRNA upstream 8299 27001117 ~ 27002570 (+) True AMCG00021729
AMCG00021726 mRNA upstream 31970 26954157 ~ 26978899 (+) True AMCG00021726
AMCG00021722 mRNA upstream 144992 26849878 ~ 26865877 (+) True AMCG00021722
AMCG00021721 mRNA upstream 165992 26836840 ~ 26844877 (+) True AMCG00021721
AMCG00021720 mRNA upstream 207884 26784119 ~ 26802985 (+) True AMCG00021720
AMCG00021728 mRNA downstream 12 27011922 ~ 27024907 (+) True AMCG00021728
AMCG00021727 mRNA downstream 14237 27026147 ~ 27054066 (+) True AMCG00021727
AMCG00021733 mRNA downstream 109421 27121331 ~ 27123223 (+) True AMCG00021733
AMCG00021734 mRNA downstream 249929 27261839 ~ 27287320 (+) True AMCG00021734
AMCG00021737 mRNA downstream 283179 27295089 ~ 27315993 (+) True AMCG00021737
TU109668 other upstream 813793 26152068 ~ 26197076 (+) False AMCG00021703
TU109403 other upstream 1644892 25276776 ~ 25365977 (+) False AMCG00021682
TU109135 other upstream 2832879 24174509 ~ 24177990 (+) True AMCG00021656
TU108421 other upstream 5774789 21235070 ~ 21236080 (+) True G86861
TU108415 other upstream 5779381 21229852 ~ 21231488 (+) False AMCG00021561
TU110128 other downstream 1766405 28778315 ~ 28778733 (+) True G88238
TU110172 other downstream 2048977 29060887 ~ 29065339 (+) True G88276
TU110265 other downstream 2366665 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other downstream 2366665 29378575 ~ 29382273 (+) False AMCG00021779
TU110433 other downstream 3255492 30267402 ~ 30394221 (+) False AMCG00021803

Expression Profile