RNA id: AMCG00021759



Basic Information


Item Value
RNA id AMCG00021759
length 489
RNA type mRNA
GC content 0.50
exon number 3
gene id AMCG00021759
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 28827986 ~ 28830377 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atgtattttcaacAGGTTGTAGAATCTACTCTGGAGGAATCAGCCACCCAATACCTCCACATTACTGAGTCCGAGGACCTCCAGGGGACTGAGGCTGCAGTAGCCGCACTCCAGGACCTTCGCTATAACACGGAAAACGGGGAAAGACTTGATGCCACAGCAGTCAATATTCTTCAGCAAATAATTGAACTGGGTTCGGAGAATCATGACACTGCAGTTGCTTCAGTAGTTGCTATGGCACCTGGAACCGTGACTGTTGTGGAACAGGTCGCCGAAGAGGAACAACAAGGGAATAACGCAGTTATGATTCAAGAGGCATTACAGGCTTCTGTAGGCCTTGGGGAGGAGCATCACCTCGTTGTCTCCTCTGACGATGTGGAAGGGATTGAGACTGTCACGGTGTACACACAAGGGGAAGATGCCTCCCAGTTCATTGTGTACGTCCAGGAGGCTGTACAAGCAGAGGAGCAAACAGTGGAAACTGTCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110122 lncRNA upstream 52793 28774871 ~ 28775193 (+) True G88232
TU110115 lncRNA upstream 129901 28697878 ~ 28698085 (+) True G88225
TU110035 lncRNA upstream 845859 27888558 ~ 27982127 (+) True G88161
TU110028 lncRNA upstream 1191230 27632915 ~ 27636756 (+) False AMCG00021745
TU110022 lncRNA upstream 1196332 27627052 ~ 27631654 (+) True G88150
TU110127 lncRNA downstream 529 28830906 ~ 28831323 (+) True G88237
TU110138 lncRNA downstream 72021 28902398 ~ 28902614 (+) True G88248
TU110140 lncRNA downstream 91252 28921629 ~ 28969948 (+) True G88249
TU110198 lncRNA downstream 434450 29264827 ~ 29268282 (+) True AMCG00021772
TU110201 lncRNA downstream 440180 29270557 ~ 29271545 (+) False AMCG00021772
AMCG00021760 mRNA upstream 23810 28767415 ~ 28804176 (+) True AMCG00021760
AMCG00021762 mRNA upstream 317171 28510456 ~ 28510815 (+) True AMCG00021762
AMCG00021761 mRNA upstream 317951 28509629 ~ 28510035 (+) True AMCG00021761
AMCG00021763 mRNA upstream 318512 28506377 ~ 28509474 (+) True AMCG00021763
AMCG00021758 mRNA upstream 489466 28317272 ~ 28338520 (+) True AMCG00021758
AMCG00021764 mRNA downstream 161213 28991590 ~ 29005897 (+) True AMCG00021764
AMCG00021765 mRNA downstream 177019 29007396 ~ 29021741 (+) True AMCG00021765
AMCG00021766 mRNA downstream 195186 29025563 ~ 29041941 (+) True AMCG00021766
AMCG00021768 mRNA downstream 245724 29076101 ~ 29095261 (+) True AMCG00021768
AMCG00021769 mRNA downstream 379900 29210277 ~ 29223312 (+) True AMCG00021769
TU110128 other upstream 49253 28778315 ~ 28778733 (+) True G88238
TU109668 other upstream 2630910 26152068 ~ 26197076 (+) False AMCG00021703
TU109403 other upstream 3462009 25276776 ~ 25365977 (+) False AMCG00021682
TU109135 other upstream 4649996 24174509 ~ 24177990 (+) True AMCG00021656
TU108421 other upstream 7591906 21235070 ~ 21236080 (+) True G86861
TU110172 other downstream 230510 29060887 ~ 29065339 (+) True G88276
TU110265 other downstream 548198 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other downstream 548198 29378575 ~ 29382273 (+) False AMCG00021779
TU110433 other downstream 1437025 30267402 ~ 30394221 (+) False AMCG00021803
TU110432 other downstream 1558460 30388837 ~ 30394221 (+) False AMCG00021803

Expression Profile