RNA id: AMCG00021762


Basic Information

Item Value
RNA id AMCG00021762
length 288
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00021762
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 28510456 ~ 28510815 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAAGTCGGAGTCCTGGATAAACTACCCATACCTGTTGTCCTAGGAAGAGATTTCCCAAAGTTTCAAGAGCTCAGGGAGCTGAAACAATCATCCTCACACCGGCCCAACACCTCTACTTCAGGGGGAATGCCAAAGCAGCAAGAACCACCTTCTGGCGTGCCTGATGCAGACGATGAAGGAGGAGAAGACCCCACACCCGAGAGAGAAGTTCCCTTGGTCATGACACAGCTGCCTCTACTACCGCTCACTGGACGCTGCAGGACAGTGCAACTGCAAAGACCCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110035 lncRNA upstream 528329 27888558 ~ 27982127 (+) True G88161
TU110028 lncRNA upstream 873700 27632915 ~ 27636756 (+) False AMCG00021745
TU110022 lncRNA upstream 878802 27627052 ~ 27631654 (+) True G88150
TU110023 lncRNA upstream 888576 27620356 ~ 27621880 (+) True G88151
TU110017 lncRNA upstream 915886 27592630 ~ 27594570 (+) True G88145
TU110115 lncRNA downstream 187063 28697878 ~ 28698085 (+) True G88225
TU110122 lncRNA downstream 264056 28774871 ~ 28775193 (+) True G88232
TU110127 lncRNA downstream 320091 28830906 ~ 28831323 (+) True G88237
TU110138 lncRNA downstream 391583 28902398 ~ 28902614 (+) True G88248
TU110140 lncRNA downstream 410814 28921629 ~ 28969948 (+) True G88249
AMCG00021761 mRNA upstream 421 28509629 ~ 28510035 (+) True AMCG00021761
AMCG00021763 mRNA upstream 982 28506377 ~ 28509474 (+) True AMCG00021763
AMCG00021758 mRNA upstream 171936 28317272 ~ 28338520 (+) True AMCG00021758
AMCG00021753 mRNA upstream 297530 28206504 ~ 28212926 (+) True AMCG00021753
AMCG00021754 mRNA upstream 321295 28038878 ~ 28189161 (+) True AMCG00021754
AMCG00021760 mRNA downstream 256600 28767415 ~ 28804176 (+) True AMCG00021760
AMCG00021759 mRNA downstream 317171 28827986 ~ 28830377 (+) True AMCG00021759
AMCG00021764 mRNA downstream 480775 28991590 ~ 29005897 (+) True AMCG00021764
AMCG00021765 mRNA downstream 496581 29007396 ~ 29021741 (+) True AMCG00021765
AMCG00021766 mRNA downstream 514748 29025563 ~ 29041941 (+) True AMCG00021766
TU109668 other upstream 2313380 26152068 ~ 26197076 (+) False AMCG00021703
TU109403 other upstream 3144479 25276776 ~ 25365977 (+) False AMCG00021682
TU109135 other upstream 4332466 24174509 ~ 24177990 (+) True AMCG00021656
TU108421 other upstream 7274376 21235070 ~ 21236080 (+) True G86861
TU108415 other upstream 7278968 21229852 ~ 21231488 (+) False AMCG00021561
TU110128 other downstream 267500 28778315 ~ 28778733 (+) True G88238
TU110172 other downstream 550072 29060887 ~ 29065339 (+) True G88276
TU110265 other downstream 867760 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other downstream 867760 29378575 ~ 29382273 (+) False AMCG00021779
TU110433 other downstream 1756587 30267402 ~ 30394221 (+) False AMCG00021803