RNA id: AMCG00021763


Basic Information

Item Value
RNA id AMCG00021763
length 273
RNA type mRNA
GC content 0.53
exon number 2
gene id AMCG00021763
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 28506377 ~ 28509474 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTTACCTGCCTGGTAGTAACGGTTCATGAGAAAAACTTTATCCTGCTGGTGATAACACttggtggagaatgcgggcagGGCTCCGAAGGTCCAACAGACACGAAGAATGCCATGGAAGATCTGGTCGAGTCCAACATCGCTCAGACAGCTGTGAACCGTGACTTGTTGACCGCACACCAAGAGAGCAATGCAGTGCTCAGACAGGAGCTCCGCACCCTCTCACAGGACCTGACAACCTGCAGCTACCCCCACAGCTGCTGTTCTGACTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110035 lncRNA upstream 524250 27888558 ~ 27982127 (+) True G88161
TU110028 lncRNA upstream 869621 27632915 ~ 27636756 (+) False AMCG00021745
TU110022 lncRNA upstream 874723 27627052 ~ 27631654 (+) True G88150
TU110023 lncRNA upstream 884497 27620356 ~ 27621880 (+) True G88151
TU110017 lncRNA upstream 911807 27592630 ~ 27594570 (+) True G88145
TU110115 lncRNA downstream 188404 28697878 ~ 28698085 (+) True G88225
TU110122 lncRNA downstream 265397 28774871 ~ 28775193 (+) True G88232
TU110127 lncRNA downstream 321432 28830906 ~ 28831323 (+) True G88237
TU110138 lncRNA downstream 392924 28902398 ~ 28902614 (+) True G88248
TU110140 lncRNA downstream 412155 28921629 ~ 28969948 (+) True G88249
AMCG00021758 mRNA upstream 167857 28317272 ~ 28338520 (+) True AMCG00021758
AMCG00021753 mRNA upstream 293451 28206504 ~ 28212926 (+) True AMCG00021753
AMCG00021754 mRNA upstream 317216 28038878 ~ 28189161 (+) True AMCG00021754
AMCG00021752 mRNA upstream 472715 27980965 ~ 28033662 (+) True AMCG00021752
AMCG00021751 mRNA upstream 525876 27866135 ~ 27980501 (+) True AMCG00021751
AMCG00021761 mRNA downstream 155 28509629 ~ 28510035 (+) True AMCG00021761
AMCG00021762 mRNA downstream 982 28510456 ~ 28510815 (+) True AMCG00021762
AMCG00021760 mRNA downstream 257941 28767415 ~ 28804176 (+) True AMCG00021760
AMCG00021759 mRNA downstream 318512 28827986 ~ 28830377 (+) True AMCG00021759
AMCG00021764 mRNA downstream 482116 28991590 ~ 29005897 (+) True AMCG00021764
TU109668 other upstream 2309301 26152068 ~ 26197076 (+) False AMCG00021703
TU109403 other upstream 3140400 25276776 ~ 25365977 (+) False AMCG00021682
TU109135 other upstream 4328387 24174509 ~ 24177990 (+) True AMCG00021656
TU108421 other upstream 7270297 21235070 ~ 21236080 (+) True G86861
TU108415 other upstream 7274889 21229852 ~ 21231488 (+) False AMCG00021561
TU110128 other downstream 268841 28778315 ~ 28778733 (+) True G88238
TU110172 other downstream 551413 29060887 ~ 29065339 (+) True G88276
TU110265 other downstream 869101 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other downstream 869101 29378575 ~ 29382273 (+) False AMCG00021779
TU110433 other downstream 1757928 30267402 ~ 30394221 (+) False AMCG00021803