Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021770 |
| length | 1269 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 4 |
| gene id | AMCG00021770 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 29268414 ~ 29271589 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005681 | spliceosomal complex | cellular_component |
| id | description |
|---|---|
| K12859 | TXNL4A, DIB1; U5 snRNP protein, DIM1 family |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU110135 | lncRNA | downstream | 437190 | 28830158 ~ 28831224 (-) | True | G88245 |
| TU110134 | lncRNA | downstream | 456449 | 28811763 ~ 28811965 (-) | True | G88244 |
| TU110133 | lncRNA | downstream | 482753 | 28785166 ~ 28785661 (-) | True | G88243 |
| TU110131 | lncRNA | downstream | 488704 | 28779343 ~ 28779710 (-) | True | G88241 |
| TU110130 | lncRNA | downstream | 489729 | 28778293 ~ 28778685 (-) | True | G88240 |
| TU110254 | lncRNA | upstream | 7772 | 29279361 ~ 29280873 (-) | True | G88347 |
| TU110362 | lncRNA | upstream | 566929 | 29838518 ~ 29841539 (-) | True | G88434 |
| TU110368 | lncRNA | upstream | 616856 | 29888445 ~ 29947540 (-) | True | G88435 |
| TU110503 | lncRNA | upstream | 1153715 | 30425304 ~ 30425552 (-) | True | G88545 |
| TU110527 | lncRNA | upstream | 1254157 | 30525746 ~ 30562800 (-) | True | G88562 |
| AMCG00021771 | mRNA | downstream | 3981 | 29262452 ~ 29264433 (-) | True | AMCG00021771 |
| AMCG00021767 | mRNA | downstream | 220942 | 29043498 ~ 29047472 (-) | True | AMCG00021767 |
| AMCG00021757 | mRNA | downstream | 676612 | 28586176 ~ 28591802 (-) | True | AMCG00021757 |
| AMCG00021756 | mRNA | downstream | 1029274 | 28234640 ~ 28239140 (-) | True | AMCG00021756 |
| AMCG00021755 | mRNA | downstream | 1049699 | 28215822 ~ 28218715 (-) | True | AMCG00021755 |
| AMCG00021774 | mRNA | upstream | 1503 | 29273092 ~ 29275349 (-) | True | AMCG00021774 |
| AMCG00021773 | mRNA | upstream | 9967 | 29281556 ~ 29285963 (-) | True | AMCG00021773 |
| AMCG00021775 | mRNA | upstream | 36298 | 29307887 ~ 29315441 (-) | True | AMCG00021775 |
| AMCG00021776 | mRNA | upstream | 46734 | 29318323 ~ 29321631 (-) | True | AMCG00021776 |
| AMCG00021777 | mRNA | upstream | 56409 | 29327998 ~ 29332145 (-) | True | AMCG00021777 |
| TU110186 | other | downstream | 196654 | 29069201 ~ 29071760 (-) | True | G88288 |
| TU110132 | other | downstream | 485133 | 28781802 ~ 28783281 (-) | True | G88242 |
| TU109843 | other | downstream | 2348570 | 26911474 ~ 26919844 (-) | False | AMCG00021723 |
| TU109676 | other | downstream | 3114039 | 26152105 ~ 26154375 (-) | True | G87871 |
| TU109647 | other | downstream | 3171630 | 26091254 ~ 26096784 (-) | True | AMCG00021700 |
| TU110330 | other | upstream | 458488 | 29730077 ~ 29742808 (-) | True | G88405 |
| TU110482 | other | upstream | 1065994 | 30337583 ~ 30424612 (-) | True | G88527 |
| TU110615 | other | upstream | 1606259 | 30877848 ~ 30888212 (-) | True | AMCG00021820 |
| TU110664 | other | upstream | 1857994 | 31129583 ~ 31132185 (-) | False | AMCG00021830 |
| TU110795 | other | upstream | 2791796 | 32063385 ~ 32069464 (-) | True | AMCG00021849 |
