RNA id: AMCG00021774


Basic Information

Item Value
RNA id AMCG00021774
length 849
RNA type mRNA
GC content 0.47
exon number 5
gene id AMCG00021774
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 29273092 ~ 29275349 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATTTACAAACCAGCTGGCTCTGGCGGTGCCTTGAACCTCACAGCCCGCTGCAAACCTAAGAGGGAGGACAGTATGCGCATACAGATCCTGAACTCCCTTCTGTTCAAGGCTATCAGTGACCTGCTACACTCTAGTGATGTGAGCTCTGAAATCTGTCTCCTAAATGTTGAAATTTCTAAGGTCTCTCTGCCCTTGGATTTCTCCTGCTGCCGAGTTTATTGGAAAACAAGTGGGACTTCAGAGAAAGATGACCTAATTCAGCAAGGCTTGAACAAGTGTGCCCCTCGCATTCGGTACCTCCTTATCGCAGACCAAATCCTTGGCAGTGTTCCACCCGTGACATTCATTAAAGATAAGGAATATGCAGCAGTATCAGAGATTGAAAGACTCTTAAAGATTGCAGACTTTGGACCAGGAGAGAACACAGAGGAATTGGAGCAAAGCTTGAAAGATAGAGGGGATTCTGTGCGTGTGGCGGCCGCTTCAGAGCAGCCCACTACTTCAACAGCCCCGGGCTTGTTTGGCATTGACCATGAAGCACTGAACAGACAGATCCTGGAGTACAAGAGGAGGACAAAAGAAGCGCTCGTTGAGTCTTCTCAGTTCAGCCTCACTGAGCAGCAACAGGAACTTCTAGCGGAGCTGAGGAAGCAGAAGATCataaacaagaagaagaagaaaaaatccaAGCGTGATATTGACATTGATATTACCCCTCAGGCATATCTCCTGGAGAAATACAGTCAGGAGCACAGTACTGAAGAACTGGAGGGTCCTGAATATAGCACTGAGGACTCTGAGATCAAGGAACTGATTTCAGAAGAGGACCAAAAGAACAGATTTGTATAA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110135 lncRNA downstream 441868 28830158 ~ 28831224 (-) True G88245
TU110134 lncRNA downstream 461127 28811763 ~ 28811965 (-) True G88244
TU110133 lncRNA downstream 487431 28785166 ~ 28785661 (-) True G88243
TU110131 lncRNA downstream 493382 28779343 ~ 28779710 (-) True G88241
TU110130 lncRNA downstream 494407 28778293 ~ 28778685 (-) True G88240
TU110254 lncRNA upstream 4012 29279361 ~ 29280873 (-) True G88347
TU110362 lncRNA upstream 563169 29838518 ~ 29841539 (-) True G88434
TU110368 lncRNA upstream 613096 29888445 ~ 29947540 (-) True G88435
TU110503 lncRNA upstream 1149955 30425304 ~ 30425552 (-) True G88545
TU110527 lncRNA upstream 1250397 30525746 ~ 30562800 (-) True G88562
AMCG00021770 mRNA downstream 1503 29268414 ~ 29271589 (-) True AMCG00021770
AMCG00021771 mRNA downstream 8659 29262452 ~ 29264433 (-) True AMCG00021771
AMCG00021767 mRNA downstream 225620 29043498 ~ 29047472 (-) True AMCG00021767
AMCG00021757 mRNA downstream 681290 28586176 ~ 28591802 (-) True AMCG00021757
AMCG00021756 mRNA downstream 1033952 28234640 ~ 28239140 (-) True AMCG00021756
AMCG00021773 mRNA upstream 6207 29281556 ~ 29285963 (-) True AMCG00021773
AMCG00021775 mRNA upstream 32538 29307887 ~ 29315441 (-) True AMCG00021775
AMCG00021776 mRNA upstream 42974 29318323 ~ 29321631 (-) True AMCG00021776
AMCG00021777 mRNA upstream 52649 29327998 ~ 29332145 (-) True AMCG00021777
AMCG00021778 mRNA upstream 90547 29365896 ~ 29374669 (-) True AMCG00021778
TU110186 other downstream 201332 29069201 ~ 29071760 (-) True G88288
TU110132 other downstream 489811 28781802 ~ 28783281 (-) True G88242
TU109843 other downstream 2353248 26911474 ~ 26919844 (-) False AMCG00021723
TU109676 other downstream 3118717 26152105 ~ 26154375 (-) True G87871
TU109647 other downstream 3176308 26091254 ~ 26096784 (-) True AMCG00021700
TU110330 other upstream 454728 29730077 ~ 29742808 (-) True G88405
TU110482 other upstream 1062234 30337583 ~ 30424612 (-) True G88527
TU110615 other upstream 1602499 30877848 ~ 30888212 (-) True AMCG00021820
TU110664 other upstream 1854234 31129583 ~ 31132185 (-) False AMCG00021830
TU110795 other upstream 2788036 32063385 ~ 32069464 (-) True AMCG00021849

Expression Profile