RNA id: AMCG00021789


Basic Information

Item Value
RNA id AMCG00021789
length 614
RNA type mRNA
GC content 0.47
exon number 4
gene id AMCG00021789
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30042879 ~ 30045102 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CATCTTCCGCAGATCATCAGCCACCAATTAGCGCCTGCATCAGCCAAGAAAaccacacagtgacacaatggTGGACAAATTTGTAGGAACATGGAAAATGATCCATAGTGATAACTTCGACGATTACATGAAGGCTCTGGGTGTGGGCTTTGCCACCCGGCAGATGGGCAACATGGCCAAACCCAATCTGGTATTCAGCGTGGAAGGGGACGTGATTTCTATCAAATCCCAGAGCGCTTTCAAGACCACCGAGGTTAAATTCAAACTGGGGGAGGAGTTTGAGGAGACCACCGCCGACGACAGAAAGACCAAGACCAAAGTTACTATGGAAAACGGCAAACTTGTGCAGAAGCAGTCGTGGGACGGCAAGCAGACGACACTAGAAAGAGAAGTGAAAGATGGAAAATTGATAGTGAAATGCACCATGGGGAATGTTGTGGCCGTAAGGACATACGAGAAAGAAGCTTAATGCTATTCAGCTCCCGAGGAGGCTGGATTTTGAAGACACCCAGCTCAGTTCAATGAGCGAAAGGCTAATATACTGCTTGTTTCCTGCTCATTTTTGTAACACCAAAGCCAATTGACATTGCACACTTTTTTTGAGAAATGATGCA

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG:

id description
K08753 FABP4, aP2; fatty acid-binding protein 4, adipocyte

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110368 lncRNA downstream 95339 29888445 ~ 29947540 (-) True G88435
TU110362 lncRNA downstream 201340 29838518 ~ 29841539 (-) True G88434
TU110254 lncRNA downstream 762006 29279361 ~ 29280873 (-) True G88347
TU110135 lncRNA downstream 1211655 28830158 ~ 28831224 (-) True G88245
TU110134 lncRNA downstream 1230914 28811763 ~ 28811965 (-) True G88244
TU110503 lncRNA upstream 380202 30425304 ~ 30425552 (-) True G88545
TU110527 lncRNA upstream 480644 30525746 ~ 30562800 (-) True G88562
TU110628 lncRNA upstream 916601 30961703 ~ 30962096 (-) True G88643
TU110741 lncRNA upstream 1753650 31798752 ~ 31836239 (-) True G88736
TU110747 lncRNA upstream 1814307 31859409 ~ 31859833 (-) True G88742
AMCG00021786 mRNA downstream 56686 29974986 ~ 29986193 (-) True AMCG00021786
AMCG00021787 mRNA downstream 196501 29842364 ~ 29846378 (-) True AMCG00021787
AMCG00021783 mRNA downstream 379992 29648775 ~ 29662887 (-) True AMCG00021783
AMCG00021780 mRNA downstream 640174 29386827 ~ 29402705 (-) True AMCG00021780
AMCG00021778 mRNA downstream 668210 29365896 ~ 29374669 (-) True AMCG00021778
AMCG00021788 mRNA upstream 2228 30047330 ~ 30048871 (-) True AMCG00021788
AMCG00021793 mRNA upstream 97120 30142222 ~ 30158707 (-) True AMCG00021793
AMCG00021796 mRNA upstream 210929 30256031 ~ 30265454 (-) True AMCG00021796
AMCG00021797 mRNA upstream 239570 30284672 ~ 30285136 (-) True AMCG00021797
AMCG00021801 mRNA upstream 336858 30381960 ~ 30386817 (-) True AMCG00021801
TU110330 other downstream 300071 29730077 ~ 29742808 (-) True G88405
TU110186 other downstream 971119 29069201 ~ 29071760 (-) True G88288
TU110132 other downstream 1259598 28781802 ~ 28783281 (-) True G88242
TU109843 other downstream 3123035 26911474 ~ 26919844 (-) False AMCG00021723
TU109676 other downstream 3888504 26152105 ~ 26154375 (-) True G87871
TU110482 other upstream 292481 30337583 ~ 30424612 (-) True G88527
TU110615 other upstream 832746 30877848 ~ 30888212 (-) True AMCG00021820
TU110664 other upstream 1084481 31129583 ~ 31132185 (-) False AMCG00021830
TU110795 other upstream 2018283 32063385 ~ 32069464 (-) True AMCG00021849
TU111038 other upstream 4301886 34346988 ~ 34380295 (-) False G89004

Expression Profile