RNA id: AMCG00021797


Basic Information

Item Value
RNA id AMCG00021797
length 465
RNA type mRNA
GC content 0.54
exon number 1
gene id AMCG00021797
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 30284672 ~ 30285136 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCAAAGGTGCTGACACAGCCTCAAACAGCTCTGTGCGGCTGAAGAAGGAGATCTCCTTGCTGCATGGGGTCTGTCTGATCGTGGGGAACATGATCGGATCTGGGATCTTCGTCTCGCCCAAGGGTGTCCTGCTGTACAGCGGCTCATATGGGCTCTCGCTGCTGGTATGGGTGATTGGAGGCATCTTTTCTGTGTTTGGAGCGCTTTGCTACGCAGAGCTTGGAACCACCATCAGGAAATCTGGAGCCAGCTATGCCTACATCCTGGAGTCTTTCGGGGGCTTTTTGGCCTTCATCAGGCTATGGACCTCCCTAATGATTGTGGAGCCAGCGTGCCAGGCGGTTATTGCACTTACCTTCTCCAACTACCTTGTGCAGCCCTTCTACCCCACCTGTCATCCCCCCTATGATGCCGTGCGACTCATAGCCGCTGCGATCATAGGTGAGAGGAACTCTTTTTAG

Function

GO:

id name namespace
GO:0003333 amino acid transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015171 amino acid transmembrane transporter activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110368 lncRNA downstream 337132 29888445 ~ 29947540 (-) True G88435
TU110362 lncRNA downstream 443133 29838518 ~ 29841539 (-) True G88434
TU110254 lncRNA downstream 1003799 29279361 ~ 29280873 (-) True G88347
TU110135 lncRNA downstream 1453448 28830158 ~ 28831224 (-) True G88245
TU110134 lncRNA downstream 1472707 28811763 ~ 28811965 (-) True G88244
TU110503 lncRNA upstream 140168 30425304 ~ 30425552 (-) True G88545
TU110527 lncRNA upstream 240610 30525746 ~ 30562800 (-) True G88562
TU110628 lncRNA upstream 676567 30961703 ~ 30962096 (-) True G88643
TU110741 lncRNA upstream 1513616 31798752 ~ 31836239 (-) True G88736
TU110747 lncRNA upstream 1574273 31859409 ~ 31859833 (-) True G88742
AMCG00021796 mRNA downstream 19218 30256031 ~ 30265454 (-) True AMCG00021796
AMCG00021793 mRNA downstream 125965 30142222 ~ 30158707 (-) True AMCG00021793
AMCG00021788 mRNA downstream 235801 30047330 ~ 30048871 (-) True AMCG00021788
AMCG00021789 mRNA downstream 239570 30042879 ~ 30045102 (-) True AMCG00021789
AMCG00021786 mRNA downstream 298479 29974986 ~ 29986193 (-) True AMCG00021786
AMCG00021801 mRNA upstream 96824 30381960 ~ 30386817 (-) True AMCG00021801
AMCG00021805 mRNA upstream 109243 30394379 ~ 30395918 (-) True AMCG00021805
AMCG00021808 mRNA upstream 140980 30426116 ~ 30428501 (-) True AMCG00021808
AMCG00021807 mRNA upstream 148791 30433927 ~ 30444924 (-) True AMCG00021807
AMCG00021806 mRNA upstream 176875 30462011 ~ 30469642 (-) True AMCG00021806
TU110330 other downstream 541864 29730077 ~ 29742808 (-) True G88405
TU110186 other downstream 1212912 29069201 ~ 29071760 (-) True G88288
TU110132 other downstream 1501391 28781802 ~ 28783281 (-) True G88242
TU109843 other downstream 3364828 26911474 ~ 26919844 (-) False AMCG00021723
TU109676 other downstream 4130297 26152105 ~ 26154375 (-) True G87871
TU110482 other upstream 52447 30337583 ~ 30424612 (-) True G88527
TU110615 other upstream 592712 30877848 ~ 30888212 (-) True AMCG00021820
TU110664 other upstream 844447 31129583 ~ 31132185 (-) False AMCG00021830
TU110795 other upstream 1778249 32063385 ~ 32069464 (-) True AMCG00021849
TU111038 other upstream 4061852 34346988 ~ 34380295 (-) False G89004

Expression Profile