RNA id: AMCG00021849


Basic Information

Item Value
RNA id AMCG00021849
length 378
RNA type mRNA
GC content 0.44
exon number 2
gene id AMCG00021849
representative False

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 32063385 ~ 32069464 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAATGCTGAGACTCAGTATGAAGATACTGTCTCAACAATGGtgttggaaaacattaagaatAAACTGATCAATGCCTTCAGGGGAACCGGAGAGCAGGTTGCAGCCTCCTGTGCTGAGAATGATACTGAGAGATGCATCAGAAAAGACTTCCATGCTAACGAAGAACTCCGCAGAGCTAAAATAGATGGAGCAATAACCTGGTTAAGGTCTGAATTGCTGGAGATGCGCTCTCAAGACAGGCAGCTTGCCAAAACACTACTGGACATAAACAGTGAAATCCAGAGACTACGGAGAGAAAACGAAGCGTCGAGTctggagaagaaagaaaacgtCACAGCTAATCACAGTGGTCTTCAATCATCCTTTCCCTTTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU110768 lncRNA downstream 78215 31988774 ~ 31989050 (-) True G88762
TU110747 lncRNA downstream 207432 31859409 ~ 31859833 (-) True G88742
TU110741 lncRNA downstream 231026 31798752 ~ 31836239 (-) True G88736
TU110628 lncRNA downstream 1105169 30961703 ~ 30962096 (-) True G88643
TU110527 lncRNA downstream 1504465 30525746 ~ 30562800 (-) True G88562
TU110805 lncRNA upstream 25587 32094702 ~ 32094939 (-) True G88795
TU110848 lncRNA upstream 623156 32692271 ~ 32692496 (-) True G88831
TU110885 lncRNA upstream 1601352 33670467 ~ 33670919 (-) True G88866
TU110890 lncRNA upstream 1691157 33760272 ~ 33760620 (-) True G88871
TU110892 lncRNA upstream 1692127 33761242 ~ 33761474 (-) True G88873
AMCG00021846 mRNA downstream 19681 32047110 ~ 32047584 (-) True AMCG00021846
AMCG00021847 mRNA downstream 29686 32031688 ~ 32037579 (-) True AMCG00021847
AMCG00021848 mRNA downstream 49131 32011442 ~ 32018134 (-) True AMCG00021848
AMCG00021828 mRNA downstream 716897 31310586 ~ 31350368 (-) True AMCG00021828
AMCG00021826 mRNA downstream 841884 31221983 ~ 31225381 (-) True AMCG00021826
AMCG00021845 mRNA upstream 26410 32095525 ~ 32097519 (-) True AMCG00021845
AMCG00021861 mRNA upstream 1937544 34006659 ~ 34014890 (-) True AMCG00021861
AMCG00021860 mRNA upstream 2110477 34179592 ~ 34189526 (-) True AMCG00021860
AMCG00021864 mRNA upstream 2173750 34242865 ~ 34249647 (-) True AMCG00021864
AMCG00021865 mRNA upstream 2182559 34251674 ~ 34260396 (-) True AMCG00021865
TU110664 other downstream 935080 31129583 ~ 31132185 (-) False AMCG00021830
TU110615 other downstream 1179053 30877848 ~ 30888212 (-) True AMCG00021820
TU110482 other downstream 1642653 30337583 ~ 30424612 (-) True G88527
TU110330 other downstream 2324457 29730077 ~ 29742808 (-) True G88405
TU110186 other downstream 2995505 29069201 ~ 29071760 (-) True G88288
TU111038 other upstream 2277873 34346988 ~ 34380295 (-) False G89004
TU111040 other upstream 2277873 34346988 ~ 34351125 (-) True G89004
TU111315 other upstream 3305901 35375016 ~ 35395771 (-) True G89217
TU111504 other upstream 3874637 35943752 ~ 35946984 (-) True G89368
TU111563 other upstream 4345924 36415039 ~ 36438350 (-) False AMCG00021895

Expression Profile