Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021852 |
| length | 1185 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 2 |
| gene id | AMCG00021852 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 32500223 ~ 32508325 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K09184 | GATAF; GATA-binding protein, other eukaryote |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU110786 | lncRNA | upstream | 432816 | 32065283 ~ 32067407 (+) | True | G88776 |
| TU110780 | lncRNA | upstream | 471057 | 32028958 ~ 32029166 (+) | True | G88771 |
| TU110767 | lncRNA | upstream | 511172 | 31988784 ~ 31989051 (+) | True | G88761 |
| TU110752 | lncRNA | upstream | 513693 | 31894467 ~ 31986530 (+) | True | G88746 |
| TU110748 | lncRNA | upstream | 640088 | 31859921 ~ 31860135 (+) | True | G88743 |
| TU110850 | lncRNA | downstream | 296993 | 32805318 ~ 32805877 (+) | True | G88833 |
| TU110855 | lncRNA | downstream | 369074 | 32877399 ~ 32877672 (+) | True | G88838 |
| TU110886 | lncRNA | downstream | 1202449 | 33710774 ~ 33711053 (+) | True | G88867 |
| TU110891 | lncRNA | downstream | 1252918 | 33761243 ~ 33761474 (+) | True | G88872 |
| TU110901 | lncRNA | downstream | 1336771 | 33845096 ~ 33845340 (+) | True | G88882 |
| AMCG00021851 | mRNA | upstream | 66285 | 32418301 ~ 32433938 (+) | True | AMCG00021851 |
| AMCG00021844 | mRNA | upstream | 280750 | 32193277 ~ 32219473 (+) | True | AMCG00021844 |
| AMCG00021850 | mRNA | upstream | 354197 | 32138572 ~ 32146026 (+) | True | AMCG00021850 |
| AMCG00021843 | mRNA | upstream | 407538 | 32082134 ~ 32092685 (+) | True | AMCG00021843 |
| AMCG00021842 | mRNA | upstream | 435176 | 32059116 ~ 32065047 (+) | True | AMCG00021842 |
| AMCG00021853 | mRNA | downstream | 486899 | 32995224 ~ 33300230 (+) | True | AMCG00021853 |
| AMCG00021857 | mRNA | downstream | 874094 | 33382419 ~ 33395225 (+) | True | AMCG00021857 |
| AMCG00021854 | mRNA | downstream | 926991 | 33435316 ~ 33453653 (+) | True | AMCG00021854 |
| AMCG00021856 | mRNA | downstream | 966843 | 33475168 ~ 33537910 (+) | True | AMCG00021856 |
| AMCG00021855 | mRNA | downstream | 1040271 | 33548596 ~ 33586500 (+) | True | AMCG00021855 |
| TU110433 | other | upstream | 2106002 | 30267402 ~ 30394221 (+) | False | AMCG00021803 |
| TU110432 | other | upstream | 2106002 | 30388837 ~ 30394221 (+) | False | AMCG00021803 |
| TU110265 | other | upstream | 3117950 | 29378575 ~ 29382273 (+) | False | AMCG00021779 |
| TU110267 | other | upstream | 3117950 | 29378575 ~ 29382273 (+) | False | AMCG00021779 |
| TU110172 | other | upstream | 3434884 | 29060887 ~ 29065339 (+) | True | G88276 |
| TU111156 | other | downstream | 2418228 | 34926553 ~ 35041288 (+) | False | AMCG00021881 |
| TU111160 | other | downstream | 2529514 | 35037839 ~ 35041288 (+) | False | AMCG00021881 |
| TU111226 | other | downstream | 2702808 | 35211133 ~ 35263537 (+) | True | G89142 |
| TU111415 | other | downstream | 3456246 | 35964571 ~ 35967384 (+) | False | G89299 |
| TU111425 | other | downstream | 3456246 | 35964571 ~ 35967384 (+) | True | G89299 |
