RNA id: AMCG00021889



Basic Information


Item Value
RNA id AMCG00021889
length 457
RNA type mRNA
GC content 0.42
exon number 2
gene id AMCG00021889
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 35668304 ~ 35672523 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CACAATGGCTGAATTTCAAGTGAAACGTGCTAACAAGTCACCTTTGAGGCCTCCCAGTGAACACTCTAAGGACAGAGCACATAAACACTTGTCTTCAGAAACTAATGGCACGGATGAAGGAGCCTCAGCTACTGAACTTTCTGCACTAGAAGATGCATTCAGGAAGTTTGCCATTCATGGTGATACCAGAGCGACAGGGAAGGAAATGCATGGGAAGAACTGGTCAAAACTGTGCAAAGACTGTGGCATCATAGATGGCAAGAACATAACACTCACCGATGTGGACATTGTCTTCAGCAAAGTAAaaaaaaaatccTGTCGAACAATCACATATGATCAGTTTATAGAAGCTCTGGGGGTACTCGCAAAGAAGCGTTTTAAAGACAAACCTGGAGAGGAAGCGGTCCAAGAAGTTTTTAAAATGGTTGAAGGAAAAACTCCTATAATATCTGGAGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU111347 lncRNA downstream 213106 35454567 ~ 35455198 (-) True G89247
TU111340 lncRNA downstream 262964 35405057 ~ 35405340 (-) True G89240
TU111310 lncRNA downstream 297824 35370106 ~ 35370480 (-) True G89212
TU111206 lncRNA downstream 587131 35079573 ~ 35081173 (-) True G89130
TU111049 lncRNA downstream 1248025 34419760 ~ 34420279 (-) True G89011
TU111367 lncRNA upstream 38940 35711463 ~ 35711716 (-) True G89264
TU111375 lncRNA upstream 144843 35817366 ~ 35817621 (-) True G89272
TU111491 lncRNA upstream 179513 35852036 ~ 35893714 (-) True G89359
TU111511 lncRNA upstream 294596 35967119 ~ 35985261 (-) True G89373
TU111572 lncRNA upstream 825671 36498194 ~ 36501828 (-) True G89428
AMCG00021885 mRNA downstream 316671 35311289 ~ 35351633 (-) True AMCG00021885
AMCG00021877 mRNA downstream 847925 34811156 ~ 34820379 (-) True AMCG00021877
AMCG00021879 mRNA downstream 858702 34790268 ~ 34809602 (-) True AMCG00021879
AMCG00021878 mRNA downstream 883592 34766852 ~ 34784712 (-) True AMCG00021878
AMCG00021870 mRNA downstream 910677 34745703 ~ 34757627 (-) True AMCG00021870
AMCG00021888 mRNA upstream 54896 35727419 ~ 35740510 (-) True AMCG00021888
AMCG00021890 mRNA upstream 125667 35798190 ~ 35799107 (-) True AMCG00021890
AMCG00021887 mRNA upstream 256068 35928591 ~ 35950291 (-) True AMCG00021887
AMCG00021891 mRNA upstream 354757 36027280 ~ 36030435 (-) True AMCG00021891
AMCG00021892 mRNA upstream 382451 36054974 ~ 36058550 (-) True AMCG00021892
TU111315 other downstream 272533 35375016 ~ 35395771 (-) True G89217
TU111038 other downstream 1288009 34346988 ~ 34380295 (-) False G89004
TU111040 other downstream 1317179 34346988 ~ 34351125 (-) True G89004
TU110795 other downstream 3598840 32063385 ~ 32069464 (-) True AMCG00021849
TU110664 other downstream 4536119 31129583 ~ 31132185 (-) False AMCG00021830
TU111504 other upstream 271229 35943752 ~ 35946984 (-) True G89368
TU111563 other upstream 742516 36415039 ~ 36438350 (-) False AMCG00021895
TU111619 other upstream 1006004 36678527 ~ 36687642 (-) False AMCG00021897
TU111771 other upstream 2588864 38261387 ~ 38283855 (-) True G89598
TU111784 other upstream 2723048 38395571 ~ 38397755 (-) True G89611

Expression Profile