RNA id: AMCG00021896


Basic Information

Item Value
RNA id AMCG00021896
length 650
RNA type mRNA
GC content 0.50
exon number 3
gene id AMCG00021896
representative False

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 36524509 ~ 36537718 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CGACGCCTTTAAGTGATTCGTAGTGGGTCTAACAAAGTGGGAGGATATTGCTTGACTGCTGTCCTCATCATGGCTTCCAGTCCGCAAATGCATTTTCGGAGAAATACGGAGAATAGACAGGCGGACAGTCAAACTCATCTTAAAACAGAGGCGGACAGAATAAAGCTGTATTTCAGGTAGAGGCCACGGCGAAATCCCTTTTGGTCTCCTCGATGTCTTCATCAAGACCCTCCAGCTTGTATAGCAACGTGACAAAGAGTGCAAACCCGGGCAGCTCCGGCAGAAATATGAAGGATTATTCTATCAATCTGTCGGTGCAGCAAGTGCTGAGCCTTTGGGTTCAAGGTAGTGTACCAACACTTCAGCACTTCACAGAAATGTGGTACTGGGTGTTTCTGTGGGCCCTGTTCTCTTCGATGTTTGTGCACGGGGCAGTGGGAGTGCTGATGTTTATCATGCTGCAGAGACACAAGCAAGGCCGGCTCATCACCTTCATCCTGATCAGTGCTGGATTCTTGGCCTCTCTCACTGGTGGGGTCATCACaaGATTCTTGCCACACTCTGAAGAAGCAGCCTCTGCCCTCAACATGAGATGGGCTGAACAACAAGCATGCTCCTGGGCTTTGTATCAGAGCCTGCAGAAGACTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU111576 lncRNA downstream 12955 36511599 ~ 36511931 (-) True G89431
TU111572 lncRNA downstream 23058 36498194 ~ 36501828 (-) True G89428
TU111511 lncRNA downstream 539625 35967119 ~ 35985261 (-) True G89373
TU111491 lncRNA downstream 631172 35852036 ~ 35893714 (-) True G89359
TU111375 lncRNA downstream 707265 35817366 ~ 35817621 (-) True G89272
TU111707 lncRNA upstream 720825 37258543 ~ 37258818 (-) True G89539
TU111717 lncRNA upstream 929063 37466781 ~ 37467591 (-) True G89549
TU111721 lncRNA upstream 1027256 37564974 ~ 37565215 (-) True G89553
TU111727 lncRNA upstream 1076679 37614397 ~ 37614596 (-) True G89559
TU111730 lncRNA upstream 1223099 37760817 ~ 37761021 (-) True G89562
AMCG00021895 mRNA downstream 107141 36414879 ~ 36417745 (-) True AMCG00021895
AMCG00021892 mRNA downstream 466336 36054974 ~ 36058550 (-) True AMCG00021892
AMCG00021891 mRNA downstream 494451 36027280 ~ 36030435 (-) True AMCG00021891
AMCG00021887 mRNA downstream 574595 35928591 ~ 35950291 (-) True AMCG00021887
AMCG00021890 mRNA downstream 725779 35798190 ~ 35799107 (-) True AMCG00021890
AMCG00021898 mRNA upstream 84813 36622531 ~ 36625236 (-) True AMCG00021898
AMCG00021897 mRNA upstream 139388 36677106 ~ 36687637 (-) True AMCG00021897
AMCG00021902 mRNA upstream 298710 36836428 ~ 36845633 (-) True AMCG00021902
AMCG00021901 mRNA upstream 330125 36867843 ~ 36874210 (-) True AMCG00021901
AMCG00021903 mRNA upstream 406315 36944033 ~ 36975116 (-) True AMCG00021903
TU111563 other downstream 86536 36415039 ~ 36438350 (-) False AMCG00021895
TU111504 other downstream 577902 35943752 ~ 35946984 (-) True G89368
TU111315 other downstream 1129115 35375016 ~ 35395771 (-) True G89217
TU111038 other downstream 2144591 34346988 ~ 34380295 (-) False G89004
TU111040 other downstream 2173761 34346988 ~ 34351125 (-) True G89004
TU111619 other upstream 140809 36678527 ~ 36687642 (-) False AMCG00021897
TU111771 other upstream 1723669 38261387 ~ 38283855 (-) True G89598
TU111784 other upstream 1857853 38395571 ~ 38397755 (-) True G89611
TU111863 other upstream 2718161 39255879 ~ 39259804 (-) False AMCG00021918
TU111960 other upstream 2948115 39485833 ~ 39486288 (-) True G89765

Expression Profile