Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021901 |
| length | 1226 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 2 |
| gene id | AMCG00021901 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 36867843 ~ 36874210 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0009612 | response to mechanical stimulus | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU111584 | lncRNA | downstream | 330132 | 36524509 ~ 36537711 (-) | True | AMCG00021896 |
| TU111576 | lncRNA | downstream | 355912 | 36511599 ~ 36511931 (-) | True | G89431 |
| TU111572 | lncRNA | downstream | 366015 | 36498194 ~ 36501828 (-) | True | G89428 |
| TU111511 | lncRNA | downstream | 882582 | 35967119 ~ 35985261 (-) | True | G89373 |
| TU111491 | lncRNA | downstream | 974129 | 35852036 ~ 35893714 (-) | True | G89359 |
| TU111707 | lncRNA | upstream | 384333 | 37258543 ~ 37258818 (-) | True | G89539 |
| TU111717 | lncRNA | upstream | 592571 | 37466781 ~ 37467591 (-) | True | G89549 |
| TU111721 | lncRNA | upstream | 690764 | 37564974 ~ 37565215 (-) | True | G89553 |
| TU111727 | lncRNA | upstream | 740187 | 37614397 ~ 37614596 (-) | True | G89559 |
| TU111730 | lncRNA | upstream | 886607 | 37760817 ~ 37761021 (-) | True | G89562 |
| AMCG00021902 | mRNA | downstream | 22210 | 36836428 ~ 36845633 (-) | True | AMCG00021902 |
| AMCG00021897 | mRNA | downstream | 180206 | 36677106 ~ 36687637 (-) | True | AMCG00021897 |
| AMCG00021898 | mRNA | downstream | 242607 | 36622531 ~ 36625236 (-) | True | AMCG00021898 |
| AMCG00021896 | mRNA | downstream | 330125 | 36524886 ~ 36537718 (-) | False | AMCG00021896 |
| AMCG00021895 | mRNA | downstream | 450098 | 36414879 ~ 36417745 (-) | True | AMCG00021895 |
| AMCG00021903 | mRNA | upstream | 69823 | 36944033 ~ 36975116 (-) | True | AMCG00021903 |
| AMCG00021904 | mRNA | upstream | 118641 | 36992851 ~ 36999640 (-) | True | AMCG00021904 |
| AMCG00021905 | mRNA | upstream | 216988 | 37091198 ~ 37171379 (-) | True | AMCG00021905 |
| AMCG00021906 | mRNA | upstream | 338406 | 37212616 ~ 37234841 (-) | True | AMCG00021906 |
| AMCG00021907 | mRNA | upstream | 1083545 | 37957755 ~ 37958533 (-) | True | AMCG00021907 |
| TU111619 | other | downstream | 180201 | 36678527 ~ 36687642 (-) | False | AMCG00021897 |
| TU111563 | other | downstream | 429493 | 36415039 ~ 36438350 (-) | False | AMCG00021895 |
| TU111504 | other | downstream | 920859 | 35943752 ~ 35946984 (-) | True | G89368 |
| TU111315 | other | downstream | 1472072 | 35375016 ~ 35395771 (-) | True | G89217 |
| TU111040 | other | downstream | 2516718 | 34346988 ~ 34351125 (-) | True | G89004 |
| TU111771 | other | upstream | 1387177 | 38261387 ~ 38283855 (-) | True | G89598 |
| TU111784 | other | upstream | 1521361 | 38395571 ~ 38397755 (-) | True | G89611 |
| TU111863 | other | upstream | 2381669 | 39255879 ~ 39259804 (-) | False | AMCG00021918 |
| TU111960 | other | upstream | 2611623 | 39485833 ~ 39486288 (-) | True | G89765 |
