RNA id: AMCG00021904



Basic Information


Item Value
RNA id AMCG00021904
length 296
RNA type mRNA
GC content 0.53
exon number 2
gene id AMCG00021904
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 36992851 ~ 36999640 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCACTCTGACACAGAATGAGATGATCTTCAAGCGCCTCCACCTAGGCACAgTAATCACACAGTCCAGTGGAAACAGCAATAGTTCCACACCTTCCCGCAAACCCCAGCAATCGGCACCCAAAGTGCGGAAGAGTGTAAGCAGTCGCATTCATGAGGCAGTAAAGGCCATTGCCCTGTGCCATAACGTGACACCAGTGTATGAGTCACACGCAGGGGTCAATGGGGAGACCGAGTACGCTGAGGCCGATCAAGATTTCAGTGATGAGAACCGCACCTACCAGGCTTCTAGCCCCGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU111584 lncRNA downstream 455140 36524509 ~ 36537711 (-) True AMCG00021896
TU111576 lncRNA downstream 480920 36511599 ~ 36511931 (-) True G89431
TU111572 lncRNA downstream 491023 36498194 ~ 36501828 (-) True G89428
TU111511 lncRNA downstream 1007590 35967119 ~ 35985261 (-) True G89373
TU111491 lncRNA downstream 1099137 35852036 ~ 35893714 (-) True G89359
TU111707 lncRNA upstream 258903 37258543 ~ 37258818 (-) True G89539
TU111717 lncRNA upstream 467141 37466781 ~ 37467591 (-) True G89549
TU111721 lncRNA upstream 565334 37564974 ~ 37565215 (-) True G89553
TU111727 lncRNA upstream 614757 37614397 ~ 37614596 (-) True G89559
TU111730 lncRNA upstream 761177 37760817 ~ 37761021 (-) True G89562
AMCG00021903 mRNA downstream 17735 36944033 ~ 36975116 (-) True AMCG00021903
AMCG00021901 mRNA downstream 118641 36867843 ~ 36874210 (-) True AMCG00021901
AMCG00021902 mRNA downstream 147218 36836428 ~ 36845633 (-) True AMCG00021902
AMCG00021897 mRNA downstream 305214 36677106 ~ 36687637 (-) True AMCG00021897
AMCG00021898 mRNA downstream 367615 36622531 ~ 36625236 (-) True AMCG00021898
AMCG00021905 mRNA upstream 91558 37091198 ~ 37171379 (-) True AMCG00021905
AMCG00021906 mRNA upstream 212976 37212616 ~ 37234841 (-) True AMCG00021906
AMCG00021907 mRNA upstream 958115 37957755 ~ 37958533 (-) True AMCG00021907
AMCG00021909 mRNA upstream 1180440 38180080 ~ 38224604 (-) True AMCG00021909
AMCG00021908 mRNA upstream 1238498 38238138 ~ 38245037 (-) True AMCG00021908
TU111619 other downstream 305209 36678527 ~ 36687642 (-) False AMCG00021897
TU111563 other downstream 554501 36415039 ~ 36438350 (-) False AMCG00021895
TU111504 other downstream 1045867 35943752 ~ 35946984 (-) True G89368
TU111315 other downstream 1597080 35375016 ~ 35395771 (-) True G89217
TU111040 other downstream 2641726 34346988 ~ 34351125 (-) True G89004
TU111771 other upstream 1261747 38261387 ~ 38283855 (-) True G89598
TU111784 other upstream 1395931 38395571 ~ 38397755 (-) True G89611
TU111863 other upstream 2256239 39255879 ~ 39259804 (-) False AMCG00021918
TU111960 other upstream 2486193 39485833 ~ 39486288 (-) True G89765

Expression Profile