RNA id: AMCG00021907


Basic Information

Item Value
RNA id AMCG00021907
length 405
RNA type mRNA
GC content 0.51
exon number 2
gene id AMCG00021907
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 37957755 ~ 37958533 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGATAACAGTGCTGGCCCGAAGCAAGCCGGGCAAACCTCGGAGCACCTCCAATATCTTCATCCTAAACCTCAGCATAGCCGACCTCTCTTACCTGCTGTTCTGCATCCCTTTCCAATCCACCGTCTACATGCTGCCAACATGGGTCCTGGGAGCTTTCATCTGCAAGTTCATACACTACTTTTTTACAGTGTCAATGCTGGTCAGTATTTTCACGCTTTCTGCCATGTCCGTGGACCGCTATATTGCCATCGTCCACTCCAGAAAGTCATCTTCGATTCGAGTAGCGCGGCACGCACTGATGGGAGTCATAGCTATATGGATGCTCTCACTAGCCATGGCTGCACCGGTTGCCTACCACCAGAACATTGTCGAAAGGAAAGGAAACGTCATGGCCAAGTAG

Function

GO:

id name namespace
GO:0007194 negative regulation of adenylate cyclase activity biological_process
GO:0007204 positive regulation of cytosolic calcium ion concentration biological_process
GO:0007218 neuropeptide signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004966 galanin receptor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU111735 lncRNA downstream 15075 37942347 ~ 37942680 (-) True G89567
TU111734 lncRNA downstream 64743 37892794 ~ 37893012 (-) True G89566
TU111733 lncRNA downstream 138986 37818562 ~ 37818769 (-) True G89565
TU111730 lncRNA downstream 196734 37760817 ~ 37761021 (-) True G89562
TU111727 lncRNA downstream 343159 37614397 ~ 37614596 (-) True G89559
TU111738 lncRNA upstream 21556 37980089 ~ 37980414 (-) True G89570
TU111754 lncRNA upstream 176727 38135260 ~ 38151050 (-) True G89584
TU111758 lncRNA upstream 194695 38153228 ~ 38153513 (-) True G89587
TU111759 lncRNA upstream 196227 38154760 ~ 38155121 (-) True G89588
TU111782 lncRNA upstream 390690 38349223 ~ 38349555 (-) True G89609
AMCG00021906 mRNA downstream 722914 37212616 ~ 37234841 (-) True AMCG00021906
AMCG00021905 mRNA downstream 786376 37091198 ~ 37171379 (-) True AMCG00021905
AMCG00021904 mRNA downstream 958115 36992851 ~ 36999640 (-) True AMCG00021904
AMCG00021903 mRNA downstream 982639 36944033 ~ 36975116 (-) True AMCG00021903
AMCG00021901 mRNA downstream 1083545 36867843 ~ 36874210 (-) True AMCG00021901
AMCG00021909 mRNA upstream 221547 38180080 ~ 38224604 (-) True AMCG00021909
AMCG00021908 mRNA upstream 279605 38238138 ~ 38245037 (-) True AMCG00021908
AMCG00021913 mRNA upstream 860878 38819411 ~ 38826295 (-) True AMCG00021913
AMCG00021921 mRNA upstream 980074 38938607 ~ 38945501 (-) True AMCG00021921
AMCG00021920 mRNA upstream 1086252 39044785 ~ 39052673 (-) True AMCG00021920
TU111619 other downstream 1270113 36678527 ~ 36687642 (-) False AMCG00021897
TU111563 other downstream 1519405 36415039 ~ 36438350 (-) False AMCG00021895
TU111504 other downstream 2010771 35943752 ~ 35946984 (-) True G89368
TU111315 other downstream 2561984 35375016 ~ 35395771 (-) True G89217
TU111040 other downstream 3606630 34346988 ~ 34351125 (-) True G89004
TU111771 other upstream 302854 38261387 ~ 38283855 (-) True G89598
TU111784 other upstream 437038 38395571 ~ 38397755 (-) True G89611
TU111863 other upstream 1297346 39255879 ~ 39259804 (-) False AMCG00021918
TU111960 other upstream 1527300 39485833 ~ 39486288 (-) True G89765

Expression Profile