RNA id: AMCG00021915


Basic Information

Item Value
RNA id AMCG00021915
length 1086
RNA type mRNA
GC content 0.43
exon number 10
gene id AMCG00021915
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 39358718 ~ 39369622 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTAATACTGGGCATCACATGACATATGTATGTCATTTATAAAGTGTACACTGCTATTGAATTTCCAGATCATCAACATCTGTCAAAATGGTGTGTAAAGAACTGCTCCTGTTTATCTTGCTGGTTCCAGTTTGCTGCTCTGGGTGTAAAGCAGACATAGAGACAAGCATCACCTGTGAAAGTACTTCAAGTCAACTCTCCTGTGcAGGAACTGATGTCATTGAGATATACTCTGCCAACTATGGCCGCACGGATAGCTCTATCTGCAGCCAGGGTAAACCTACTTCACAGCTTGTCAATGTGAAGTGTTTCCTCCCTCAAGCAATTGACATTGTCTCCCAGAGGTGTAGTGGCAAGACAAACTGTGAAGTGACAGCCAATAACGCTGTCTTCACTGATCCCTGTGTTGGTACCTACAAATATCTGGAGATTACATATGCCTGTATCCCTACTGAGATGGGTTCAATTAAGATCTATAAAGCCAATTACGGTCGCACGGACTCCTCTGTCTGCAGTAACAACAAACCCAGTGAACAGCTGGTCAATGTCAATTGTTACCTGCCTAAAACACTTGATGTCATGTCCAAAAGGTGTGATGGCAAGACGTCTTGTGAAGTTATGGCCACCAATGATGTTTTCTCTGACCCCTGTTATGGCACATACAAATACCTTGAGGTTGTGTATGCCTGCCTATCTGTCAGGAGCGATGCCATTAAGATCTACTCTGCCAACTATGGACGCACAGATAAATCTATCTGCAGTGTCGATAAACCCCTTTCGCAGCTGACTAATGTCCAGTGTGATGGCAAGAAAAGCTGTGAAGTGGAAGCCAGCAATGCTGTTTTCTCTGACCCCTGTGTCGGCACATTTAAATATCTAGAGATTTTGTATGACTGCCTCCCTGACTGCTGACTACCTGGATATGGGTTCAGGCTGGAGATAGGAAATGGAATGATCAAGAAAgattcattttgaaaatcttTGTGTGAACCACTGCACTGTTTCAGCTTTAATAAGTTCAGTAATAAGGAAGTGTctacttgtttttttctcaacaTTACAACTGCACTCTATAATAAAACTTACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU111888 lncRNA upstream 65001 39293401 ~ 39293717 (+) True G89705
TU111887 lncRNA upstream 65335 39292764 ~ 39293383 (+) True G89704
TU111886 lncRNA upstream 66508 39286975 ~ 39292210 (+) True G89703
TU111882 lncRNA upstream 74567 39282858 ~ 39284151 (+) True G89700
TU111873 lncRNA upstream 88821 39268581 ~ 39269897 (+) True G89695
TU111959 lncRNA downstream 116211 39485833 ~ 39486893 (+) True G89764
AMCG00021914 mRNA upstream 493099 38855826 ~ 38865619 (+) True AMCG00021914
AMCG00021912 mRNA upstream 961044 38395806 ~ 38397674 (+) True AMCG00021912
AMCG00021910 mRNA upstream 1216559 38137122 ~ 38142159 (+) True AMCG00021910
AMCG00021911 mRNA upstream 1237146 38120324 ~ 38121572 (+) True AMCG00021911
AMCG00021900 mRNA upstream 2700997 36650232 ~ 36657721 (+) False AMCG00021900
AMCG00021927 mRNA downstream 90637 39460259 ~ 39461475 (+) True AMCG00021927
TU111805 other upstream 536033 38817872 ~ 38822685 (+) True G89632
TU111747 other upstream 1207669 38121257 ~ 38151049 (+) True G89578
TU111748 other upstream 1207669 38121257 ~ 38151049 (+) False G89578
TU111415 other upstream 3391334 35964571 ~ 35967384 (+) False G89299
TU111914 other downstream 30902 39400524 ~ 39408261 (+) True G89728

Expression Profile