RNA id: AMCG00021920


Basic Information

Item Value
RNA id AMCG00021920
length 525
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00021920
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 39044785 ~ 39052673 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGCAACTGGACTGTAACAGAATTTTTCAAACCCTTTGGGCCCAACCGCAAAGCAGAGAATAAATGGCTGAAGTGCCAGGCCTCGACAGAAAAATCAATGCCTGGTTATACAGACATGACAGACCCAAGCCTTGCAATTCACTGCTCACCAAAGTCTGTGCAACTCACCGCTCTGCAGTGTTCTGAGAAGTGGGTAACCTTCACCTTTTCCcccttctttttctcttttttcctttctttcttacttATTTTCTCCCCTCTCCTTCTTGGTCTTTACAGAAAATTTGAATGTGAGCTCTGTGACCGGTCTTTCAGTGAGAAGTGGGCGCTGAACAATCACATGAAGCTGCACACAGGAGAGAAGCCCTACAAATGCGCCTGGCACACTTGCCACTATTCCTTCCTGACCTTGTCGGCGATGAAAGACCATTACAGGACCCACACAGGAGAGAAGTCGTTCCTCTGTGACCTTTGTGGGTTCGCTGGTGGGACACGTCATGCCCTGACCAAACACAGACGCCAGCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU111830 lncRNA downstream 104961 38939562 ~ 38939824 (-) True G89657
TU111804 lncRNA downstream 227635 38816944 ~ 38817150 (-) True G89631
TU111803 lncRNA downstream 400747 38643828 ~ 38644038 (-) True G89630
TU111798 lncRNA downstream 553200 38491335 ~ 38491585 (-) True G89625
TU111791 lncRNA downstream 619345 38422700 ~ 38425440 (-) True G89618
TU111901 lncRNA upstream 281252 39333925 ~ 39334125 (-) True G89716
TU111908 lncRNA upstream 330976 39383649 ~ 39385676 (-) True G89723
TU111909 lncRNA upstream 333145 39385818 ~ 39386082 (-) True G89724
TU111943 lncRNA upstream 409802 39462475 ~ 39462921 (-) True G89748
TU111944 lncRNA upstream 411759 39464432 ~ 39465633 (-) True G89749
AMCG00021921 mRNA downstream 99284 38938607 ~ 38945501 (-) True AMCG00021921
AMCG00021913 mRNA downstream 218490 38819411 ~ 38826295 (-) True AMCG00021913
AMCG00021908 mRNA downstream 799748 38238138 ~ 38245037 (-) True AMCG00021908
AMCG00021909 mRNA downstream 820181 38180080 ~ 38224604 (-) True AMCG00021909
AMCG00021907 mRNA downstream 1086252 37957755 ~ 37958533 (-) True AMCG00021907
AMCG00021919 mRNA upstream 138225 39190898 ~ 39192682 (-) True AMCG00021919
AMCG00021917 mRNA upstream 156342 39209015 ~ 39234436 (-) True AMCG00021917
AMCG00021918 mRNA upstream 203208 39255881 ~ 39276056 (-) True AMCG00021918
AMCG00021916 mRNA upstream 230597 39283270 ~ 39285802 (-) True AMCG00021916
AMCG00021922 mRNA upstream 319133 39371806 ~ 39373457 (-) True AMCG00021922
TU111784 other downstream 647030 38395571 ~ 38397755 (-) True G89611
TU111771 other downstream 760930 38261387 ~ 38283855 (-) True G89598
TU111619 other downstream 2357143 36678527 ~ 36687642 (-) False AMCG00021897
TU111563 other downstream 2606435 36415039 ~ 36438350 (-) False AMCG00021895
TU111504 other downstream 3097801 35943752 ~ 35946984 (-) True G89368
TU111863 other upstream 203206 39255879 ~ 39259804 (-) False AMCG00021918
TU111960 other upstream 433160 39485833 ~ 39486288 (-) True G89765

Expression Profile