RNA id: TU103850


Basic Information

Item Value
RNA id TU103850
length 321
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G83221
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 1346451 ~ 1346771 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccgcatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU103770 lncRNA upstream 563795 777159 ~ 782656 (+) True G83153
TU103771 lncRNA upstream 565119 777159 ~ 781332 (+) False G83153
TU103717 lncRNA upstream 1060319 285921 ~ 286132 (+) True G83114
TU103687 lncRNA upstream 1101132 243756 ~ 245319 (+) True G83086
TU103914 lncRNA downstream 570957 1917728 ~ 1919310 (+) False AMCG00021063
TU103978 lncRNA downstream 736343 2083114 ~ 2083451 (+) True G83325
TU103991 lncRNA downstream 758411 2105182 ~ 2106906 (+) True G83338
TU104037 lncRNA downstream 854523 2201294 ~ 2201559 (+) True G83374
TU104040 lncRNA downstream 872322 2219093 ~ 2221723 (+) True AMCG00021076
AMCG00021052 mRNA upstream 294269 1045175 ~ 1052182 (+) True AMCG00021052
AMCG00021049 mRNA upstream 419978 918017 ~ 926473 (+) False AMCG00021049
AMCG00021050 mRNA upstream 448571 879806 ~ 897880 (+) True AMCG00021050
AMCG00021047 mRNA upstream 489981 849545 ~ 856470 (+) True AMCG00021047
AMCG00021045 mRNA upstream 589712 749408 ~ 756739 (+) True AMCG00021045
AMCG00021058 mRNA downstream 362562 1709333 ~ 1739006 (+) True AMCG00021058
AMCG00021063 mRNA downstream 570717 1917488 ~ 1919366 (+) True AMCG00021063
AMCG00021062 mRNA downstream 619041 1965812 ~ 1973074 (+) True AMCG00021062
AMCG00021071 mRNA downstream 695053 2041824 ~ 2048003 (+) True AMCG00021071
AMCG00021070 mRNA downstream 730653 2077424 ~ 2081654 (+) True AMCG00021070
TU103781 other upstream 419976 918006 ~ 926475 (+) True AMCG00021049
TU104336 other downstream 2451070 3797841 ~ 3798783 (+) True G83624
TU104390 other downstream 2780500 4127271 ~ 4129216 (+) False AMCG00021113
TU104395 other downstream 2884201 4230972 ~ 4233756 (+) False AMCG00021114
TU104813 other downstream 5768610 7115381 ~ 7121237 (+) False AMCG00021150
TU104814 other downstream 5768610 7115381 ~ 7121237 (+) False AMCG00021150

Expression Profile