RNA id: TU104186


Basic Information

Item Value
RNA id TU104186
length 212
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G83493
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 2764793 ~ 2765004 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atcctatccagtctgtttttgaatgttcccaaattgtctcttcagccacatcgctggggagtttgttcagattgggacgcctctctgtgtgaagaagtgtctcctgttttcggtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104145 lncRNA upstream 157123 2607269 ~ 2607670 (+) True G83459
TU104126 lncRNA upstream 238814 2522863 ~ 2525979 (+) True G83443
TU104109 lncRNA upstream 247878 2516259 ~ 2516915 (+) True G83427
TU104074 lncRNA upstream 471752 2278796 ~ 2293041 (+) True G83397
TU104040 lncRNA upstream 543070 2219093 ~ 2221723 (+) True AMCG00021076
TU104190 lncRNA downstream 172481 2937485 ~ 2937685 (+) True G83497
TU104211 lncRNA downstream 322690 3087694 ~ 3087909 (+) True G83516
TU104226 lncRNA downstream 588981 3353985 ~ 3354286 (+) True G83528
TU104333 lncRNA downstream 1024023 3789027 ~ 3789246 (+) True G83621
TU104334 lncRNA downstream 1029985 3794989 ~ 3795242 (+) True G83622
AMCG00021089 mRNA upstream 18440 2719456 ~ 2746353 (+) True AMCG00021089
AMCG00021088 mRNA upstream 94018 2652713 ~ 2670775 (+) True AMCG00021088
AMCG00021087 mRNA upstream 167085 2588168 ~ 2597708 (+) True AMCG00021087
AMCG00021083 mRNA upstream 252586 2506216 ~ 2512207 (+) True AMCG00021083
AMCG00021084 mRNA upstream 284761 2457929 ~ 2480032 (+) True AMCG00021084
AMCG00021093 mRNA downstream 700756 3465760 ~ 3471536 (+) True AMCG00021093
AMCG00021095 mRNA downstream 818900 3583904 ~ 3587462 (+) True AMCG00021095
AMCG00021097 mRNA downstream 904054 3669058 ~ 3672076 (+) True AMCG00021097
AMCG00021096 mRNA downstream 908812 3673816 ~ 3674034 (+) True AMCG00021096
AMCG00021098 mRNA downstream 910075 3675079 ~ 3676379 (+) True AMCG00021098
TU103781 other upstream 1838318 918006 ~ 926475 (+) True AMCG00021049
TU104336 other downstream 1032837 3797841 ~ 3798783 (+) True G83624
TU104390 other downstream 1362267 4127271 ~ 4129216 (+) False AMCG00021113
TU104395 other downstream 1465968 4230972 ~ 4233756 (+) False AMCG00021114
TU104813 other downstream 4350377 7115381 ~ 7121237 (+) False AMCG00021150
TU104814 other downstream 4350377 7115381 ~ 7121237 (+) False AMCG00021150

Expression Profile