Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU104771 |
| length | 1235 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 3 |
| gene id | G83983 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 7085218 ~ 7088239 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104762 | lncRNA | upstream | 29086 | 7051197 ~ 7056132 (+) | True | G83976 |
| TU104690 | lncRNA | upstream | 403301 | 6679203 ~ 6681917 (+) | True | G83914 |
| TU104679 | lncRNA | upstream | 422399 | 6660729 ~ 6662819 (+) | True | G83904 |
| TU104675 | lncRNA | upstream | 441695 | 6643182 ~ 6643523 (+) | True | G83900 |
| TU104599 | lncRNA | upstream | 538617 | 6544531 ~ 6546601 (+) | True | AMCG00021133 |
| TU104815 | lncRNA | downstream | 27142 | 7115381 ~ 7121237 (+) | True | AMCG00021150 |
| TU104856 | lncRNA | downstream | 308821 | 7397060 ~ 7398518 (+) | True | G84049 |
| TU104868 | lncRNA | downstream | 337692 | 7425931 ~ 7426347 (+) | True | G84061 |
| TU104888 | lncRNA | downstream | 423130 | 7511369 ~ 7511988 (+) | True | G84078 |
| TU104903 | lncRNA | downstream | 465381 | 7553620 ~ 7560120 (+) | True | G84090 |
| AMCG00021148 | mRNA | upstream | 44367 | 7026401 ~ 7040851 (+) | True | AMCG00021148 |
| AMCG00021147 | mRNA | upstream | 93230 | 6979040 ~ 6991988 (+) | True | AMCG00021147 |
| AMCG00021146 | mRNA | upstream | 127655 | 6956712 ~ 6957563 (+) | True | AMCG00021146 |
| AMCG00021144 | mRNA | upstream | 160629 | 6915817 ~ 6924589 (+) | True | AMCG00021144 |
| AMCG00021143 | mRNA | upstream | 174804 | 6894003 ~ 6910414 (+) | True | AMCG00021143 |
| AMCG00021150 | mRNA | downstream | 23758 | 7111997 ~ 7118948 (+) | False | AMCG00021150 |
| AMCG00021149 | mRNA | downstream | 34335 | 7122574 ~ 7128057 (+) | True | AMCG00021149 |
| AMCG00021151 | mRNA | downstream | 40424 | 7128663 ~ 7146664 (+) | True | AMCG00021151 |
| AMCG00021158 | mRNA | downstream | 272121 | 7360360 ~ 7390841 (+) | True | AMCG00021158 |
| AMCG00021160 | mRNA | downstream | 315913 | 7404152 ~ 7420194 (+) | True | AMCG00021160 |
| TU104395 | other | upstream | 2851462 | 4230972 ~ 4233756 (+) | False | AMCG00021114 |
| TU104390 | other | upstream | 2956002 | 4127271 ~ 4129216 (+) | False | AMCG00021113 |
| TU104336 | other | upstream | 3286435 | 3797841 ~ 3798783 (+) | True | G83624 |
| TU103781 | other | upstream | 6158743 | 918006 ~ 926475 (+) | True | AMCG00021049 |
| TU104813 | other | downstream | 27142 | 7115381 ~ 7121237 (+) | False | AMCG00021150 |
| TU104814 | other | downstream | 27142 | 7115381 ~ 7121237 (+) | False | AMCG00021150 |
| TU105166 | other | downstream | 1543488 | 8631727 ~ 8633410 (+) | True | G84301 |
| TU105325 | other | downstream | 2328028 | 9416267 ~ 9423419 (+) | True | G84425 |
| TU105614 | other | downstream | 3874909 | 10963148 ~ 10987174 (+) | True | G84657 |
