RNA id: TU106125


Basic Information

Item Value
RNA id TU106125
length 248
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G85059
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 13968135 ~ 13968382 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

caagtcttcaaaaccatgaaaggcttcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccgggacacaaatggaaattgggcttcaaggcattcaagatggaaaacaggagacacttcttcacacagagaatcaatctgaacaaactctccagcgatgtggttgaagctgaaaatgtgggaacatttaaaatcagactggataggatccttggatcactgtaattaatg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU106124 lncRNA downstream 1225 13965936 ~ 13966910 (-) True G85058
TU106113 lncRNA downstream 18315 13948307 ~ 13949820 (-) True AMCG00021302
TU106104 lncRNA downstream 37854 13929842 ~ 13930281 (-) True G85044
TU106060 lncRNA downstream 105591 13858304 ~ 13862544 (-) True G85012
TU106161 lncRNA upstream 61308 14029690 ~ 14034000 (-) True G85089
TU106163 lncRNA upstream 65842 14034224 ~ 14036645 (-) True G85091
TU106209 lncRNA upstream 89538 14057920 ~ 14062793 (-) False AMCG00021304
TU106213 lncRNA upstream 89538 14057920 ~ 14071206 (-) True AMCG00021304
TU106210 lncRNA upstream 100961 14069343 ~ 14071206 (-) False AMCG00021304
AMCG00021299 mRNA downstream 3924 13954051 ~ 13964211 (-) True AMCG00021299
AMCG00021302 mRNA downstream 17091 13948952 ~ 13951044 (-) False AMCG00021302
AMCG00021301 mRNA downstream 29977 13930836 ~ 13938158 (-) True AMCG00021301
AMCG00021290 mRNA downstream 43543 13896893 ~ 13924592 (-) True AMCG00021290
AMCG00021284 mRNA downstream 71860 13881140 ~ 13896275 (-) True AMCG00021284
AMCG00021300 mRNA upstream 32214 14000596 ~ 14013160 (-) True AMCG00021300
AMCG00021298 mRNA upstream 68851 14037233 ~ 14040889 (-) True AMCG00021298
AMCG00021303 mRNA upstream 77653 14046035 ~ 14047696 (-) True AMCG00021303
AMCG00021304 mRNA upstream 89536 14057918 ~ 14062793 (-) False AMCG00021304
AMCG00021311 mRNA upstream 98224 14066606 ~ 14073961 (-) True AMCG00021311
TU106093 other downstream 50267 13869939 ~ 13917868 (-) True G85037
TU105989 other downstream 340388 13627335 ~ 13627747 (-) True G84952
TU105842 other downstream 1166549 12719864 ~ 12801586 (-) True AMCG00021259
TU105805 other downstream 1440441 12527093 ~ 12527694 (-) True G84814
TU104623 other downstream 7421558 6544492 ~ 6546577 (-) True G83864
TU106219 other upstream 81592 14049974 ~ 14051897 (-) True G85115
TU106928 other upstream 2272622 16241004 ~ 16242655 (-) False AMCG00021387
TU107075 other upstream 2678757 16647139 ~ 16649825 (-) False AMCG00021412
TU107077 other upstream 2678757 16647139 ~ 16649825 (-) True AMCG00021412
TU107277 other upstream 3330498 17298880 ~ 17303470 (-) False AMCG00021435

Expression Profile