Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU107274 |
| length | 655 |
| lncRNA type | inter_gene |
| GC content | 0.68 |
| exon number | 1 |
| gene id | G85941 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 17298159 ~ 17298813 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0048570 | notochord morphogenesis | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU107214 | lncRNA | upstream | 210365 | 17086752 ~ 17087794 (+) | True | G85903 |
| TU107184 | lncRNA | upstream | 255584 | 17036572 ~ 17042575 (+) | True | G85876 |
| TU107124 | lncRNA | upstream | 488845 | 16807806 ~ 16809314 (+) | True | G85823 |
| TU107071 | lncRNA | upstream | 648311 | 16647139 ~ 16649848 (+) | True | G85784 |
| TU107051 | lncRNA | upstream | 701257 | 16596201 ~ 16596902 (+) | True | G85766 |
| TU107314 | lncRNA | downstream | 160680 | 17459493 ~ 17459941 (+) | True | G85976 |
| TU107316 | lncRNA | downstream | 171512 | 17470325 ~ 17473396 (+) | True | AMCG00021441 |
| TU107331 | lncRNA | downstream | 208713 | 17507526 ~ 17509083 (+) | True | G85992 |
| TU107332 | lncRNA | downstream | 210272 | 17509085 ~ 17509295 (+) | True | G85993 |
| TU107338 | lncRNA | downstream | 214315 | 17513128 ~ 17513621 (+) | True | G85999 |
| AMCG00021431 | mRNA | upstream | 47843 | 17241682 ~ 17250316 (+) | True | AMCG00021431 |
| AMCG00021433 | mRNA | upstream | 71231 | 17225840 ~ 17226928 (+) | True | AMCG00021433 |
| AMCG00021430 | mRNA | upstream | 200780 | 17082739 ~ 17097379 (+) | True | AMCG00021430 |
| AMCG00021429 | mRNA | upstream | 217642 | 17072351 ~ 17080517 (+) | True | AMCG00021429 |
| AMCG00021423 | mRNA | upstream | 227029 | 17066613 ~ 17071130 (+) | True | AMCG00021423 |
| AMCG00021434 | mRNA | downstream | 40603 | 17339416 ~ 17364818 (+) | True | AMCG00021434 |
| AMCG00021438 | mRNA | downstream | 72669 | 17371482 ~ 17399636 (+) | True | AMCG00021438 |
| AMCG00021436 | mRNA | downstream | 105205 | 17404018 ~ 17419822 (+) | True | AMCG00021436 |
| AMCG00021443 | mRNA | downstream | 128704 | 17427517 ~ 17428203 (+) | True | AMCG00021443 |
| AMCG00021442 | mRNA | downstream | 131653 | 17430466 ~ 17436598 (+) | True | AMCG00021442 |
| TU107177 | other | upstream | 294028 | 16997877 ~ 17004131 (+) | True | G85869 |
| TU107080 | other | upstream | 584121 | 16656644 ~ 16714038 (+) | False | G85787 |
| TU107079 | other | upstream | 636277 | 16656644 ~ 16661882 (+) | True | G85787 |
| TU107049 | other | upstream | 705186 | 16590181 ~ 16592973 (+) | True | G85764 |
| TU106850 | other | upstream | 1224541 | 16063600 ~ 16073618 (+) | False | AMCG00021373 |
| TU107506 | other | downstream | 949677 | 18248490 ~ 18249686 (+) | True | G86121 |
| TU107757 | other | downstream | 1980952 | 19279765 ~ 19282915 (+) | False | AMCG00021485 |
| TU107857 | other | downstream | 2200987 | 19499800 ~ 19501242 (+) | True | G86407 |
| TU108101 | other | downstream | 3043797 | 20342610 ~ 20401249 (+) | False | G86601 |
| TU108117 | other | downstream | 3079610 | 20378423 ~ 20380424 (+) | True | G86616 |
