RNA id: TU107323



Basic Information


Item Value
RNA id TU107323
length 201
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G85985
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17476704 ~ 17476904 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


acagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaaagtcctactcggagagactgagggaactgaaccttttcaccctggaacagaggagactacgtggggacttgattcaagtcttcaaaatcatgaaaggcatcaaccacat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU107315 lncRNA downstream 16763 17459727 ~ 17459941 (-) True G85977
TU107288 lncRNA downstream 58156 17417997 ~ 17418548 (-) True G85952
TU107266 lncRNA downstream 185843 17248967 ~ 17290861 (-) True G85938
TU107220 lncRNA downstream 348039 17128464 ~ 17128665 (-) True G85909
TU107216 lncRNA downstream 387869 17087933 ~ 17088835 (-) True G85905
TU107339 lncRNA upstream 36293 17513197 ~ 17513620 (-) True G86000
TU107353 lncRNA upstream 49849 17526753 ~ 17527139 (-) True G86012
TU107354 lncRNA upstream 55704 17532608 ~ 17532829 (-) True G86013
TU107370 lncRNA upstream 104338 17581242 ~ 17585441 (-) True AMCG00021444
TU107371 lncRNA upstream 104338 17581242 ~ 17585441 (-) False AMCG00021444
AMCG00021437 mRNA downstream 1071 17456860 ~ 17475633 (-) True AMCG00021437
AMCG00021435 mRNA downstream 177078 17286249 ~ 17299626 (-) True AMCG00021435
AMCG00021432 mRNA downstream 195903 17249632 ~ 17280801 (-) True AMCG00021432
AMCG00021425 mRNA downstream 434197 17035957 ~ 17042507 (-) True AMCG00021425
AMCG00021427 mRNA downstream 453565 17022545 ~ 17023139 (-) True AMCG00021427
AMCG00021446 mRNA upstream 35658 17512562 ~ 17517667 (-) True AMCG00021446
AMCG00021445 mRNA upstream 41477 17518381 ~ 17539713 (-) True AMCG00021445
AMCG00021444 mRNA upstream 104423 17581327 ~ 17585399 (-) False AMCG00021444
AMCG00021447 mRNA upstream 111634 17588538 ~ 17589461 (-) True AMCG00021447
AMCG00021448 mRNA upstream 139401 17616305 ~ 17632305 (-) True AMCG00021448
TU107289 other downstream 53286 17419604 ~ 17423418 (-) True G85953
TU107277 other downstream 173234 17298880 ~ 17303470 (-) False AMCG00021435
TU107075 other downstream 826879 16647139 ~ 16649825 (-) False AMCG00021412
TU107077 other downstream 826879 16647139 ~ 16649825 (-) True AMCG00021412
TU106928 other downstream 1234049 16241004 ~ 16242655 (-) False AMCG00021387
TU107350 other upstream 70258 17547162 ~ 17552766 (-) True G86010
TU107351 other upstream 70258 17547162 ~ 17552264 (-) False G86010
TU107397 other upstream 449195 17926099 ~ 17926708 (-) True G86049
TU107532 other upstream 770757 18247661 ~ 18248894 (-) True AMCG00021460
TU107653 other upstream 1344629 18821533 ~ 18909908 (-) True G86241

Expression Profile