RNA id: TU107347


Basic Information

Item Value
RNA id TU107347
length 202
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G86007
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 17532619 ~ 17532820 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ttggagatagtcaacatgggtttagacgaggcagatcatgtcttactaatctattagaattttttgaacatgcaactgcagctgtagatcatgtgaaagcatatgatatgatatacttagatttccaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtaggcattcagggtaatgtaag

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107346 lncRNA upstream 5493 17526726 ~ 17527126 (+) True G86006
TU107338 lncRNA upstream 18998 17513128 ~ 17513621 (+) True G85999
TU107332 lncRNA upstream 23324 17509085 ~ 17509295 (+) True G85993
TU107331 lncRNA upstream 23536 17507526 ~ 17509083 (+) True G85992
TU107316 lncRNA upstream 59223 17470325 ~ 17473396 (+) True AMCG00021441
TU107359 lncRNA downstream 48487 17581307 ~ 17585472 (+) False G86018
TU107362 lncRNA downstream 48487 17581307 ~ 17584713 (+) True G86018
TU107364 lncRNA downstream 81794 17614614 ~ 17616453 (+) True G86020
TU107381 lncRNA downstream 115454 17648274 ~ 17648531 (+) True G86034
TU107502 lncRNA downstream 690015 18222835 ~ 18226242 (+) True G86117
AMCG00021440 mRNA upstream 25489 17494793 ~ 17507130 (+) True AMCG00021440
AMCG00021439 mRNA upstream 39960 17483091 ~ 17492659 (+) True AMCG00021439
AMCG00021441 mRNA upstream 60885 17470366 ~ 17471734 (+) False AMCG00021441
AMCG00021442 mRNA upstream 96021 17430466 ~ 17436598 (+) True AMCG00021442
AMCG00021443 mRNA upstream 104416 17427517 ~ 17428203 (+) True AMCG00021443
AMCG00021451 mRNA downstream 500371 18033191 ~ 18050404 (+) True AMCG00021451
AMCG00021450 mRNA downstream 528801 18061621 ~ 18067774 (+) True AMCG00021450
AMCG00021453 mRNA downstream 576258 18109078 ~ 18112221 (+) True AMCG00021453
AMCG00021454 mRNA downstream 635027 18167847 ~ 18170544 (+) True AMCG00021454
AMCG00021455 mRNA downstream 644360 18177180 ~ 18188162 (+) True AMCG00021455
TU107177 other upstream 528488 16997877 ~ 17004131 (+) True G85869
TU107080 other upstream 818581 16656644 ~ 16714038 (+) False G85787
TU107079 other upstream 870737 16656644 ~ 16661882 (+) True G85787
TU107049 other upstream 939646 16590181 ~ 16592973 (+) True G85764
TU106850 other upstream 1459001 16063600 ~ 16073618 (+) False AMCG00021373
TU107506 other downstream 715670 18248490 ~ 18249686 (+) True G86121
TU107757 other downstream 1746945 19279765 ~ 19282915 (+) False AMCG00021485
TU107857 other downstream 1966980 19499800 ~ 19501242 (+) True G86407
TU108101 other downstream 2809790 20342610 ~ 20401249 (+) False G86601
TU108117 other downstream 2845603 20378423 ~ 20380424 (+) True G86616

Expression Profile