RNA id: TU107662


Basic Information

Item Value
RNA id TU107662
length 278
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G86249
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 18918254 ~ 18918531 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CAGAGGTGCTCATTCCGAGCACACGGGAGtcggggcctggggtctggaagctcaacacctctctgctcgatgaccctcttgttattaagacctttagcagacgcctcgaggagtggaggaccctgagggacctttttgattctcccatagagtggtgggagatggtgaagaaaaggaccaagggctacttcattcagctgggGAAACGGAAAGCTCGTGAGAGGCGGGCGAGATATTCCCATCTAAACACCTGCCTCCAGCCCCTGAGtcttttacag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107657 lncRNA downstream 107107 18750672 ~ 18811147 (-) True G86244
TU107652 lncRNA downstream 255125 18659298 ~ 18663129 (-) True G86240
TU107634 lncRNA downstream 286787 18592640 ~ 18631467 (-) True G86222
TU107637 lncRNA downstream 294664 18622563 ~ 18623590 (-) True G86225
TU107606 lncRNA downstream 368497 18549444 ~ 18549757 (-) True G86203
TU107666 lncRNA upstream 87085 19005616 ~ 19006432 (-) True G86253
TU107706 lncRNA upstream 234474 19153005 ~ 19153285 (-) True G86285
TU107752 lncRNA upstream 340026 19258557 ~ 19258855 (-) True G86324
TU107823 lncRNA upstream 527886 19446417 ~ 19448494 (-) True G86386
TU107825 lncRNA upstream 530198 19448729 ~ 19449107 (-) False AMCG00021495
AMCG00021470 mRNA downstream 109003 18797918 ~ 18809251 (-) True AMCG00021470
AMCG00021471 mRNA downstream 145667 18762928 ~ 18772587 (-) True AMCG00021471
AMCG00021467 mRNA downstream 233833 18663223 ~ 18684421 (-) True AMCG00021467
AMCG00021469 mRNA downstream 310101 18595142 ~ 18608153 (-) True AMCG00021469
AMCG00021468 mRNA downstream 342820 18566104 ~ 18575434 (-) True AMCG00021468
AMCG00021474 mRNA upstream 74193 18992724 ~ 19026083 (-) True AMCG00021474
AMCG00021476 mRNA upstream 140353 19058884 ~ 19073801 (-) True AMCG00021476
AMCG00021477 mRNA upstream 157450 19075981 ~ 19100225 (-) True AMCG00021477
AMCG00021482 mRNA upstream 305900 19224431 ~ 19231673 (-) True AMCG00021482
AMCG00021481 mRNA upstream 330363 19248894 ~ 19252262 (-) True AMCG00021481
TU107653 other downstream 8346 18821533 ~ 18909908 (-) True G86241
TU107532 other downstream 669360 18247661 ~ 18248894 (-) True AMCG00021460
TU107397 other downstream 991546 17926099 ~ 17926708 (-) True G86049
TU107350 other downstream 1365488 17547162 ~ 17552766 (-) True G86010
TU107351 other downstream 1365990 17547162 ~ 17552264 (-) False G86010
TU107753 other upstream 342414 19260945 ~ 19267461 (-) False AMCG00021483
TU107755 other upstream 356823 19275354 ~ 19278023 (-) True G86327
TU107835 other upstream 547529 19466060 ~ 19468733 (-) False AMCG00021495
TU108097 other upstream 1410891 20329422 ~ 20335304 (-) True G86600
TU108146 other upstream 1439770 20358301 ~ 20360255 (-) True G86640

Expression Profile