Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU108136 |
| length | 737 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G86633 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 20462255 ~ 20462991 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007185 | transmembrane receptor protein tyrosine phosphatase signaling pathway | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU108128 | lncRNA | upstream | 52597 | 20408404 ~ 20409658 (+) | True | G86625 |
| TU108113 | lncRNA | upstream | 90719 | 20370645 ~ 20371536 (+) | True | AMCG00021517 |
| TU108061 | lncRNA | upstream | 163473 | 20298462 ~ 20298782 (+) | True | G86573 |
| TU108008 | lncRNA | upstream | 256717 | 20205192 ~ 20205538 (+) | True | G86536 |
| TU108001 | lncRNA | upstream | 309489 | 20152245 ~ 20152766 (+) | True | G86529 |
| TU108173 | lncRNA | downstream | 37795 | 20500786 ~ 20501303 (+) | True | G86665 |
| TU108178 | lncRNA | downstream | 45517 | 20508508 ~ 20547410 (+) | True | G86668 |
| TU108195 | lncRNA | downstream | 149635 | 20612626 ~ 20614365 (+) | True | G86685 |
| TU108197 | lncRNA | downstream | 157515 | 20620506 ~ 20620721 (+) | True | G86687 |
| TU108205 | lncRNA | downstream | 236223 | 20699214 ~ 20702457 (+) | True | G86695 |
| AMCG00021522 | mRNA | upstream | 68994 | 20389757 ~ 20393261 (+) | True | AMCG00021522 |
| AMCG00021517 | mRNA | upstream | 91239 | 20368153 ~ 20371016 (+) | False | AMCG00021517 |
| AMCG00021518 | mRNA | upstream | 122517 | 20314180 ~ 20339738 (+) | True | AMCG00021518 |
| AMCG00021513 | mRNA | upstream | 187872 | 20214149 ~ 20274383 (+) | True | AMCG00021513 |
| AMCG00021512 | mRNA | upstream | 348160 | 20112413 ~ 20114095 (+) | True | AMCG00021512 |
| AMCG00021526 | mRNA | downstream | 18220 | 20481211 ~ 20493174 (+) | True | AMCG00021526 |
| AMCG00021527 | mRNA | downstream | 43034 | 20506025 ~ 20524326 (+) | True | AMCG00021527 |
| AMCG00021530 | mRNA | downstream | 69177 | 20532168 ~ 20550930 (+) | True | AMCG00021530 |
| AMCG00021529 | mRNA | downstream | 91502 | 20554493 ~ 20563626 (+) | True | AMCG00021529 |
| AMCG00021528 | mRNA | downstream | 114702 | 20577693 ~ 20589296 (+) | True | AMCG00021528 |
| TU108101 | other | upstream | 61006 | 20342610 ~ 20401249 (+) | False | G86601 |
| TU108100 | other | upstream | 61006 | 20398926 ~ 20401249 (+) | True | G86601 |
| TU108117 | other | upstream | 81831 | 20378423 ~ 20380424 (+) | True | G86616 |
| TU107857 | other | upstream | 961013 | 19499800 ~ 19501242 (+) | True | G86407 |
| TU107757 | other | upstream | 1179340 | 19279765 ~ 19282915 (+) | False | AMCG00021485 |
| TU108198 | other | downstream | 204479 | 20667470 ~ 20667927 (+) | True | G86688 |
| TU108360 | other | downstream | 635428 | 21098419 ~ 21109368 (+) | True | AMCG00021550 |
| TU108358 | other | downstream | 635601 | 21098592 ~ 21109368 (+) | False | AMCG00021550 |
| TU108371 | other | downstream | 695633 | 21158624 ~ 21165032 (+) | False | AMCG00021551 |
| TU108414 | other | downstream | 766861 | 21229852 ~ 21231488 (+) | True | AMCG00021561 |
