RNA id: TU108491



Basic Information


Item Value
RNA id TU108491
length 259
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G86925
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 21784876 ~ 21785134 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


attagtaagacatgatctgcctcgtctaaacctatgttgactatctccaagaatatggttttcattaagatgctcctctattttctgtctaatcattttttccaacattttacaagtgatgcaggtgagactgattggtctgtaatttcctggctcagttttgtccagTCAGTTGGTTCATCCCctttctaagtgtcatttggaatatttgagttagcggcctataaataatttccctaatttctttaagtactgttgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108475 lncRNA downstream 113561 21666402 ~ 21671315 (-) True AMCG00021569
TU108455 lncRNA downstream 268642 21516032 ~ 21516234 (-) True G86893
TU108442 lncRNA downstream 490973 21291373 ~ 21293903 (-) True G86881
TU108401 lncRNA downstream 593944 21189839 ~ 21190932 (-) True G86850
TU108400 lncRNA downstream 596038 21186768 ~ 21188838 (-) True G86849
TU108574 lncRNA upstream 345672 22130806 ~ 22188140 (-) True G86997
TU108699 lncRNA upstream 843465 22628599 ~ 22628891 (-) True G87092
TU108737 lncRNA upstream 905474 22690608 ~ 22690889 (-) True G87116
TU108813 lncRNA upstream 1222260 23007394 ~ 23014782 (-) True G87181
TU108827 lncRNA upstream 1290500 23075634 ~ 23076015 (-) True G87193
AMCG00021568 mRNA downstream 22969 21674291 ~ 21761907 (-) True AMCG00021568
AMCG00021569 mRNA downstream 114736 21668928 ~ 21670140 (-) False AMCG00021569
AMCG00021564 mRNA downstream 473977 21295597 ~ 21310899 (-) True AMCG00021564
AMCG00021558 mRNA downstream 543785 21239074 ~ 21241091 (-) True AMCG00021558
AMCG00021559 mRNA downstream 547412 21232931 ~ 21237464 (-) True AMCG00021559
AMCG00021572 mRNA upstream 50889 21836023 ~ 21855452 (-) True AMCG00021572
AMCG00021577 mRNA upstream 186155 21971289 ~ 21992069 (-) True AMCG00021577
AMCG00021576 mRNA upstream 216545 22001679 ~ 22012233 (-) True AMCG00021576
AMCG00021580 mRNA upstream 235851 22020985 ~ 22026204 (-) True AMCG00021580
AMCG00021578 mRNA upstream 249726 22034860 ~ 22063539 (-) True AMCG00021578
TU108350 other downstream 701306 21063858 ~ 21083570 (-) True G86808
TU108218 other downstream 1059996 20721884 ~ 20724880 (-) True AMCG00021534
TU108155 other downstream 1387093 20395612 ~ 20397783 (-) True G86649
TU108146 other downstream 1424621 20358301 ~ 20360255 (-) True G86640
TU108097 other downstream 1449572 20329422 ~ 20335304 (-) True G86600
TU108883 other upstream 1370053 23155187 ~ 23160977 (-) False AMCG00021619
TU108932 other upstream 1553117 23338251 ~ 23338484 (-) True G87263
TU109433 other upstream 3618516 25403650 ~ 25406538 (-) True G87674
TU109596 other upstream 4120310 25905444 ~ 25908005 (-) True G87806
TU109647 other upstream 4306120 26091254 ~ 26096784 (-) True AMCG00021700

Expression Profile