RNA id: TU108898


Basic Information

Item Value
RNA id TU108898
length 263
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G87234
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 23197581 ~ 23197843 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggaactgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacacacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108868 lncRNA downstream 91393 23093588 ~ 23106188 (-) True G87218
TU108838 lncRNA downstream 106470 23089602 ~ 23091111 (-) True G87203
TU108827 lncRNA downstream 121566 23075634 ~ 23076015 (-) True G87193
TU108813 lncRNA downstream 182799 23007394 ~ 23014782 (-) True G87181
TU108737 lncRNA downstream 506692 22690608 ~ 22690889 (-) True G87116
TU108931 lncRNA upstream 131482 23329325 ~ 23330344 (-) False AMCG00021630
TU108938 lncRNA upstream 173347 23371190 ~ 23372192 (-) True G87269
TU108952 lncRNA upstream 235373 23433216 ~ 23481900 (-) True G87282
TU108957 lncRNA upstream 285129 23482972 ~ 23488212 (-) True G87287
TU108960 lncRNA upstream 285129 23482972 ~ 23488212 (-) False G87287
AMCG00021619 mRNA downstream 36590 23156889 ~ 23160991 (-) True AMCG00021619
AMCG00021621 mRNA downstream 45260 23145357 ~ 23152321 (-) True AMCG00021621
AMCG00021622 mRNA downstream 70104 23127220 ~ 23127477 (-) True AMCG00021622
AMCG00021620 mRNA downstream 87830 23096480 ~ 23109751 (-) True AMCG00021620
AMCG00021614 mRNA downstream 129842 23061533 ~ 23067739 (-) True AMCG00021614
AMCG00021627 mRNA upstream 57096 23254939 ~ 23262180 (-) True AMCG00021627
AMCG00021629 mRNA upstream 67907 23265750 ~ 23303746 (-) True AMCG00021629
AMCG00021630 mRNA upstream 131784 23329627 ~ 23332968 (-) True AMCG00021630
AMCG00021634 mRNA upstream 297182 23495025 ~ 23498563 (-) True AMCG00021634
AMCG00021637 mRNA upstream 468750 23666593 ~ 23667210 (-) True AMCG00021637
TU108883 other downstream 36604 23155187 ~ 23160977 (-) False AMCG00021619
TU108350 other downstream 2114011 21063858 ~ 21083570 (-) True G86808
TU108218 other downstream 2472701 20721884 ~ 20724880 (-) True AMCG00021534
TU108155 other downstream 2799798 20395612 ~ 20397783 (-) True G86649
TU108146 other downstream 2837326 20358301 ~ 20360255 (-) True G86640
TU108932 other upstream 140408 23338251 ~ 23338484 (-) True G87263
TU109433 other upstream 2205807 25403650 ~ 25406538 (-) True G87674
TU109596 other upstream 2707601 25905444 ~ 25908005 (-) True G87806
TU109647 other upstream 2893411 26091254 ~ 26096784 (-) True AMCG00021700
TU109676 other upstream 2954262 26152105 ~ 26154375 (-) True G87871

Expression Profile