RNA id: TU109875



Basic Information


Item Value
RNA id TU109875
length 208
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G88025
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 27060182 ~ 27060389 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTCTAATGACATGTTATCAGATCCATTCTGAACATGATCAAAAATATAATCCAGAAAATATTCTCCTGCTGGCAGAACTCGCACACTCATACAATCCCCTCTGAGCACATGGTAAATGATGTTGCCGAAGACAACGTCAATGCTCTGTGTGAATTCATCACTTGAGGAAATGTTGCTTTCTTCAAGAATGTGACTTCCTGTGAGACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU109874 lncRNA upstream 2571 27057374 ~ 27057611 (+) True G88024
TU109837 lncRNA upstream 153817 26896725 ~ 26906365 (+) True G87993
TU109792 lncRNA upstream 242900 26813030 ~ 26817282 (+) True G87962
TU109790 lncRNA upstream 249315 26808257 ~ 26810867 (+) True G87961
TU109766 lncRNA upstream 322299 26720909 ~ 26737883 (+) True G87942
TU109876 lncRNA downstream 1430 27061819 ~ 27062090 (+) True G88026
TU109877 lncRNA downstream 3174 27063563 ~ 27063951 (+) True G88027
TU109893 lncRNA downstream 78438 27138827 ~ 27139443 (+) True G88043
TU109895 lncRNA downstream 135263 27195652 ~ 27195870 (+) True G88045
TU109938 lncRNA downstream 348470 27408859 ~ 27409687 (+) True G88076
AMCG00021727 mRNA upstream 6116 27026147 ~ 27054066 (+) True AMCG00021727
AMCG00021728 mRNA upstream 35275 27011922 ~ 27024907 (+) True AMCG00021728
AMCG00021730 mRNA upstream 48272 27010869 ~ 27011910 (+) True AMCG00021730
AMCG00021729 mRNA upstream 57612 27001117 ~ 27002570 (+) True AMCG00021729
AMCG00021726 mRNA upstream 81283 26954157 ~ 26978899 (+) True AMCG00021726
AMCG00021733 mRNA downstream 60942 27121331 ~ 27123223 (+) True AMCG00021733
AMCG00021734 mRNA downstream 201450 27261839 ~ 27287320 (+) True AMCG00021734
AMCG00021737 mRNA downstream 234700 27295089 ~ 27315993 (+) True AMCG00021737
AMCG00021739 mRNA downstream 271226 27331615 ~ 27332691 (+) True AMCG00021739
AMCG00021740 mRNA downstream 337180 27397569 ~ 27405275 (+) True AMCG00021740
TU109668 other upstream 863106 26152068 ~ 26197076 (+) False AMCG00021703
TU109403 other upstream 1694205 25276776 ~ 25365977 (+) False AMCG00021682
TU109135 other upstream 2882192 24174509 ~ 24177990 (+) True AMCG00021656
TU108421 other upstream 5824102 21235070 ~ 21236080 (+) True G86861
TU108415 other upstream 5828694 21229852 ~ 21231488 (+) False AMCG00021561
TU110128 other downstream 1717926 28778315 ~ 28778733 (+) True G88238
TU110172 other downstream 2000498 29060887 ~ 29065339 (+) True G88276
TU110265 other downstream 2318186 29378575 ~ 29382273 (+) False AMCG00021779
TU110267 other downstream 2318186 29378575 ~ 29382273 (+) False AMCG00021779
TU110433 other downstream 3207013 30267402 ~ 30394221 (+) False AMCG00021803

Expression Profile